Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4476 ATGGGCACCAACCAGAGTGAGGTTGAGAGGAAGAGTGAGAAAGAGCTCAAGCATCTTGGCTTTGTGAGGATTGCAGCGATTCAAGCCTTTGTTTGCGTCTCAAATCTCTATCAATACGCCAAGCATAACTCTGGCCCTCTCAGATCTGCCGTTGGAGCGGTTGAAGGGACTGTTTCCGCCGTTCTCGGCCCCGTATACAACAAATTCAGGGATGTACCTGACGATCTCCTTGTTTTTGTCGATAATAAGGTGGATGAAGCTAGCCAGAAATTCGAGGAGCATGCACCTCCATTAGTGAAGCAGGTAGCAAGGCAAGCAAAGGGGTTGATTGAGGAAGTGACACAGAAAGCAGAGAAGGTTGTGAGTGAGGCTCAATCCGGAGGAGCAAAAGCAGCTGCACATTATGTTGCTGAGGAGTCCAAACACATTGTGCTAACTGGCTCAGTTAAATTGTGGAACGGTCTAAACCACTATCAACTGTTCCATGCAGTGGCAGAGATGGCTGTTCCCACTGCTGCACACTGGTTGGAAAGCTACAATCATGTGGTTGAGGACATGACTGCTAAGGGTTATGGTGTTTTTCAGTATTTGCCTTTGGTTCCAATTGATGAGATAGCCAAGGCATTTAAACAGGGAGAAGGAGAAGCGAATGTCAATGAGAATGGAGATGGAGGTGTCATTACTGGACAGATAGCACAATCTGAGTAA 708 0.4703 MGTNQSEVERKSEKELKHLGFVRIAAIQAFVCVSNLYQYAKHNSGPLRSAVGAVEGTVSAVLGPVYNKFRDVPDDLLVFVDNKVDEASQKFEEHAPPLVKQVARQAKGLIEEVTQKAEKVVSEAQSGGAKAAAHYVAEESKHIVLTGSVKLWNGLNHYQLFHAVAEMAVPTAAHWLESYNHVVEDMTAKGYGVFQYLPLVPIDEIAKAFKQGEGEANVNENGDGGVITGQIAQSE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4476 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 5 219 IPR008802 -
Ahy13g4476 235 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
Ahy13g4476 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 5 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4476 Ahy-Chr13 144921056 144922834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4476 - - gmx:100499806 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4476 13 144921056 144922834 Ahy3g4193 3 141912326 141914119 hybridization
Ahy20g0960 20 13587660 13589739 Ahy13g4476 13 144921056 144922834 PCT
Ahy10g0676 10 7361020 7363182 Ahy13g4476 13 144921056 144922834 PCT
Ahy13g4476 13 144921056 144922834 Ahy20g0960 20 13587660 13589739 PCT
Ahy13g4476 13 144921056 144922834 Ahy10g0676 10 7361020 7363182 PCT