Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0676 ATGGCCACCACCGAGAAAGAGGTGAAATTTGAGAACAAGAACAAAGAGCTGAAGCATCTTGGGTTTGTGAGGGTTGCTGCAATTCAAACCTTTGTGGTTGTGACAAATCTGTATGAATACGCAAAGCAAAACTCAGGCCCTTTGAGATCCGCCGTTGGGACGGTTGAGGGCACTGTAACTTCCGTTCTGGGCCCTGTCTACAACAAACTCAAGGATGTCCCAGATGATGTCCTCGTTTTTGTTGACAACAAGGTGGATGATGCTACTCACAAGTTCGGTGAGCATGCTCCTTCTTTTGCTAAGCAGGGTGCTTCCAAAGCTAGGAGCTTGATTCAGAGTCTTGCACATGAAGCGGGACGATTTGCAAGTGAGGTTCAATGTGGAGGGCCAAGAGCAGCTATACATTATGTAACCAGAGAGTCAAAGGATTTGGTGCTGATTAACTCAGTGAAGTTATGGAAAGGACTAAACCACTTCCCACCATTTCATGCACTGGCAGATGTGGCTGTTCCCACTGCTGCTCATTGTTCGGATAAGTATAACCACATAGTTAAGCATTTGAGTGGTAAAGGGTATCCTCTCTCTGGTTATTTGCCTTTGATTCCCGTTGATGACATTGCCAAGGTGTTTAGGCAGGGCGGTGAGGCAAGCATGAACGGAGGAGATGAAGAAGCCTGTAAGAATGGGAAGAGATCATAA 699 0.4635 MATTEKEVKFENKNKELKHLGFVRVAAIQTFVVVTNLYEYAKQNSGPLRSAVGTVEGTVTSVLGPVYNKLKDVPDDVLVFVDNKVDDATHKFGEHAPSFAKQGASKARSLIQSLAHEAGRFASEVQCGGPRAAIHYVTRESKDLVLINSVKLWKGLNHFPPFHALADVAVPTAAHCSDKYNHIVKHLSGKGYPLSGYLPLIPVDDIAKVFRQGGEASMNGGDEEACKNGKRS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0676 232 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 225 IPR008802 -
Ahy10g0676 232 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 225 - -
Ahy10g0676 232 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0676 Ahy-Chr10 7361020 7363182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0676 - - gmx:100816931 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0960 20 13587660 13589739 Ahy10g0676 10 7361020 7363182 hybridization
Ahy10g0676 10 7361020 7363182 Ahy13g4476 13 144921056 144922834 PCT
Ahy10g0676 10 7361020 7363182 Ahy3g4193 3 141912326 141914119 PCT
Ahy13g4476 13 144921056 144922834 Ahy10g0676 10 7361020 7363182 PCT
Ahy3g4193 3 141912326 141914119 Ahy10g0676 10 7361020 7363182 PCT