Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1066 ATGTTCTCATCGGTGAGAATCTCTCGGGTTGAGATATTTAGTTATTTACCGGTTTGGCAGTTCTCAATTCCCAGTTCAGCCTCATCCATGGAGTCTCTCTTTTCACTGAAACCCTCTCATCACCACCACCAATCCCTTCTCTCTCTTAATCACCACCATTCAACAACACCATTCTCTTCCGTTCCTTTCCTTTCTCTACCATCTTCCTCCTCTTCCTCTTCCGCTTCCTTTCGATTTTCACCCATCAAAGCCTCACACTCACCCAAAAACCCATTAACCCACGTGACACAAACACTAAACCCCTTCTTCTCACCCATCCTCAAATCAGCATGCATCGCAGCTGCATTGTTCCTCATGCGCCTTCACTTCAATTCTCCCGCCCTCGCCGCTGCCGTTACAGCCGCACCGCAACCACCATCTCCCGCGACGGAATCCTCTCCGGAAGATGCCTCCGGCGAAGAAAAGGTTTCGGGTGAAGAGAACAGCACCGTTGAAGATCTTCAGTCCCTCATCGAAGCAAAGATCAGAGAGCGTAAATTCGACGAAGCGGTTCCGATGGTAGACCGCTTGATTGAAATTGAGCCGGAGGAGCTTGATTGGCCGCTGCTGAAGGCGCACCTGCGTGCCCGCAACAACGACCACGCGGTGGCGCGGAACTTGTTCGAAGAAGTGCTGAAGAGAGACCCTTATAACGTGATTGCGCTTCATGGTCTTCTTGTGGCGGCTTTTGAGTTGAAGGAACCAACAAAGGATTTTATGCCAAGGTTTGAAGAAGCTGTGAAGTTCTTGGAGAAGGAAGAGAGGGATTCTGAGGCAAGGGACTTGAAGCTGCTAATTGCGCAGGTTAAGGTTTTGGAAGGGGAATTATCCAGTGCGCTGAAGGTCTATGAGGATCTTGTGACAAAAGAACCGAAGGATTTTAGGCCTTACTTGTGTAAGGGTGTGGTGTATACTATGATGAAGAAGAAAGATGAAGCTGAAAGACAGTTTGAGAAGTTTAGGGAACTTGTCCCGGAGGATCATCATCACAAAGATTATTTTGAGGACAATGCTAATGTGTTCTTGCAGAAGCTAGAGCAAAAGAAAGAAGCAGCTCTGAAGAGCATGTTTGTGGGTGATCTACTGATCTTGATGACATCGGAGGGCTTTTCCTGTGTCCATTACAGACTACAGTGTATGGTTGGATCCTATTGTGCTTATTCTAGTTACTCACTGGTGGCTTTACTTGCTCAACTCTGA 1239 0.477 MFSSVRISRVEIFSYLPVWQFSIPSSASSMESLFSLKPSHHHHQSLLSLNHHHSTTPFSSVPFLSLPSSSSSSSASFRFSPIKASHSPKNPLTHVTQTLNPFFSPILKSACIAAALFLMRLHFNSPALAAAVTAAPQPPSPATESSPEDASGEEKVSGEENSTVEDLQSLIEAKIRERKFDEAVPMVDRLIEIEPEELDWPLLKAHLRARNNDHAVARNLFEEVLKRDPYNVIALHGLLVAAFELKEPTKDFMPRFEEAVKFLEKEERDSEARDLKLLIAQVKVLEGELSSALKVYEDLVTKEPKDFRPYLCKGVVYTMMKKKDEAERQFEKFRELVPEDHHHKDYFEDNANVFLQKLEQKKEAALKSMFVGDLLILMTSEGFSCVHYRLQCMVGSYCAYSSYSLVALLAQL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1066 412 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 40 361 - -
Ahy2g1066 412 ProSiteProfiles TPR repeat profile. 307 340 IPR019734 GO:0005515
Ahy2g1066 412 SUPERFAMILY TPR-like 175 340 IPR011990 GO:0005515
Ahy2g1066 412 Gene3D Tetratricopeptide repeat domain 113 368 IPR011990 GO:0005515
Ahy2g1066 412 MobiDBLite consensus disorder prediction 134 163 - -
Ahy2g1066 412 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 40 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1066 Ahy-Chr2 30163175 30166827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1066 - - aip:107625205 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1175 12 32154378 32157460 Ahy2g1066 2 30163175 30166827 hybridization
Ahy16g1497 16 33039721 33041155 Ahy2g1066 2 30163175 30166827 PCT
Ahy6g1359 6 21460788 21462220 Ahy2g1066 2 30163175 30166827 PCT
Ahy2g1066 2 30163175 30166827 Ahy16g1497 16 33039721 33041155 PCT
Ahy2g1066 2 30163175 30166827 Ahy6g1359 6 21460788 21462220 PCT