Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0700 ATGTCTGGGGAAGAGTATGATGCACAAGATGCAGGCTATGTGCCTGAAAACCCTGAATTTCCACAAAACCATTCCGACGAACATGATGAAGGAAATGTGATTGATGATGCGGGGTTTCCTCAACTGCAGCCTGATCAACATGACGATGGCAATTTGGATGAGGGAGCTAATCCTCCTGAAAATCAGTTTGATGGCCACGAAATTGAAGGTTTGCCCGAAGATACCGATGCTCATCCACAAGAGAATGCTGAGGAGGAGGAGGAACATCATGATATTGGGGATGTTACTGGGGATTTCAATTCTCAGGAGAAACAGGGAGCACAGGATAATTCGAAAGGAAATGAAATAAAGAAGTGGCCTGGTTGGCCTGGAGAGAATGTTTTCCGGATGTTGATTCCTGTACAAAAGGTTGGCAGTATCATCGGCCGCAAGGGAGAGTTTATTAAGAAAATGACGGAAGAGACCAAAGCTCGCATTAAAATTCTTGATGGTCCGCCAGGAACCATGGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAGCCAGATCGCGCCATACCGCCTGCTGTGGAGGGTTTGTTAAGGGTTCATAAACAAGTTGTCAATGTGGACCACAATCCTCCAGATGCATCGGCTGCATCAAACCAAGTTGTTACGAGGCTTCTGGTGGCAGATACTCAAGCAGGAAGCTTGATCGGGAAGCAGGGTTCCACAGTAAAGTCCTTTCAAGATAACACTGGTTGCAATATACGTGTTCTTGGATCAGCTGAATACCTGCCTGTATTTGCTCTACGGGATGATAGTGTTGTTGAAATACAAGGGGAGTCTGCTGGGGTTCACAAGGCAGTTGAACTTATTGCACTTCATCTCCGTAAATTCCTGGTTGACCGCGGCATAGTTGGAGTATTTGAAACACAGATGCAAAGGCCAGATGCTCGAGTTAACCAGAATGTGCCCCCACCTCAAGCTTGGGGTCCCCCACATCCACAAGGGTTCCCCACTCCTGGCAGTGGTGGACCTGCTTTTGCACCCAATCCTCAATATATGCCTCCTTCACATAACTACGATAATTACTACCCACCTCCTGATCTGCCTCCCGTAGATAAGCTCATTCCTCCACCTGCCTATGCAAGGGATACTTCTCAATCACAGCAGTCTGTTGCAAATAAGGTCACACAGCACATGCAAATTCCTCTAACCTATGCAGATGCAGTTATTGGAGCATCAGGATCAAATATCAGCTACATTCGCCGTGCTAGTGGCGCAAGTATTACAATTCAGGAGACCAGGGGTATACCAGGGGAAATGACTGTTGAGATAAGCGGCACCGCGTCACAAATACAGGCAGCTCAACAACTGGTGCAGAATTTCATGGCTGAAGCGGCGAGTGCGGCACAAGATCATATGGGGGGGTCAATTAACCAAGGTTACAATTCCTATCCTACCAATGCTTCTGTTTATGCATCTCCACCTTCAAGTGCTGGAGCACATACAGGCCATGCACCTTCTGCTGATTATGGTTCGGTGTATGGAACCAATTATGGTTACTAA 1548 0.4696 MSGEEYDAQDAGYVPENPEFPQNHSDEHDEGNVIDDAGFPQLQPDQHDDGNLDEGANPPENQFDGHEIEGLPEDTDAHPQENAEEEEEHHDIGDVTGDFNSQEKQGAQDNSKGNEIKKWPGWPGENVFRMLIPVQKVGSIIGRKGEFIKKMTEETKARIKILDGPPGTMERAVMVSAKEEPDRAIPPAVEGLLRVHKQVVNVDHNPPDASAASNQVVTRLLVADTQAGSLIGKQGSTVKSFQDNTGCNIRVLGSAEYLPVFALRDDSVVEIQGESAGVHKAVELIALHLRKFLVDRGIVGVFETQMQRPDARVNQNVPPPQAWGPPHPQGFPTPGSGGPAFAPNPQYMPPSHNYDNYYPPPDLPPVDKLIPPPAYARDTSQSQQSVANKVTQHMQIPLTYADAVIGASGSNISYIRRASGASITIQETRGIPGEMTVEISGTASQIQAAQQLVQNFMAEAASAAQDHMGGSINQGYNSYPTNASVYASPPSSAGAHTGHAPSADYGSVYGTNYGY* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0700 515 CDD PCBP_like_KH 127 196 - -
Ahy2g0700 515 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 49 509 - -
Ahy2g0700 515 ProSiteProfiles Type-1 KH domain profile. 125 192 - -
Ahy2g0700 515 Coils Coil 446 466 - -
Ahy2g0700 515 ProSiteProfiles Type-1 KH domain profile. 215 285 - -
Ahy2g0700 515 MobiDBLite consensus disorder prediction 319 333 - -
Ahy2g0700 515 CDD KH-I 391 454 - -
Ahy2g0700 515 ProSiteProfiles Type-1 KH domain profile. 389 453 - -
Ahy2g0700 515 MobiDBLite consensus disorder prediction 1 120 - -
Ahy2g0700 515 Gene3D K Homology domain, type 1 377 465 IPR036612 GO:0003723
Ahy2g0700 515 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 117 180 IPR036612 GO:0003723
Ahy2g0700 515 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 49 509 - -
Ahy2g0700 515 MobiDBLite consensus disorder prediction 66 97 - -
Ahy2g0700 515 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 205 296 IPR036612 GO:0003723
Ahy2g0700 515 Pfam KH domain 128 180 IPR004088 GO:0003723
Ahy2g0700 515 Pfam KH domain 391 454 IPR004088 GO:0003723
Ahy2g0700 515 Pfam KH domain 218 286 IPR004088 GO:0003723
Ahy2g0700 515 MobiDBLite consensus disorder prediction 354 371 - -
Ahy2g0700 515 Gene3D - 125 293 - -
Ahy2g0700 515 SMART kh_6 388 458 IPR004087 GO:0003676
Ahy2g0700 515 SMART kh_6 214 290 IPR004087 GO:0003676
Ahy2g0700 515 SMART kh_6 124 197 IPR004087 GO:0003676
Ahy2g0700 515 MobiDBLite consensus disorder prediction 310 389 - -
Ahy2g0700 515 CDD PCBP_like_KH 217 286 - -
Ahy2g0700 515 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 381 460 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0700 Ahy-Chr2 11610627 11616363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0700 K21444 - gmx:100818363 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0823 12 15076169 15081622 Ahy2g0700 2 11610627 11616363 hybridization
Ahy16g0139 16 1449804 1454401 Ahy2g0700 2 11610627 11616363 PCT
Ahy6g1191 6 17483381 17488028 Ahy2g0700 2 11610627 11616363 PCT
Ahy2g0700 2 11610627 11616363 Ahy16g0139 16 1449804 1454401 PCT
Ahy2g0700 2 11610627 11616363 Ahy6g1191 6 17483381 17488028 PCT