Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0959 ATGAGAACCAGAAGAGGAGGCCTCTCTTATCCTCCACTTCTACCCTTATCCACCATGTGTTCAAACAAAGCTCTCTCAGAAAGGTCCTCTTTCAACACACTCACACCACGCCCCAATAGAAACAGAAACAACAAAATGCCTTCTTCGCAACAACAATTTGTTATCCGTAAAAGGCACAAGACATTATCATTATTATCATCTTCCTCTTCCGACACAACAACAACAACAGTCGGAGGCTCCGAACTCTTGGAGATTTTGCCGGATGACCTTCTCCTCTCAATCCTCGCGAAACTTAGTTCGTCCTCCAATTCTCCTTCCGATTTCATCCGTGTTCTTTTGACGTGTAAAAGGCTGAACACGTTGGGTCTTCACTCGATGGTTCTATCAAAAGCATCCCAAAAAACATTCTCAGTCAAAGCCAGAAGCTGGTCAGAATCTTCTCACCGCTTCCTCAAACGTTGCGCTGATGCCGGAAACATCGAAGCATGCTACACTCTTGGAATGATTCGGTTCTACTGTTTAGAACACCGTGAGAGTGGAAGGTCGCTAATATCGAAGGCGGCGATGAGGTGTCACGCGCCGGCACTTTACTCTCTGGCCGTTTTACAGTTCAATGGGAGCGGAGCCTCGAAGGACGACAAGGACCTAAGGGGCGGTGTGGCTCTTTGCGCACGCGCCGCATTCCTCGGCCACGTCGACGCGCTGCGCGAGTTGGGTCATTGCTTGCAAGACGGTTACGGAGTTAAGCAAAACGTTATGGAAGGGCGACGGTTTCTCGTTCAAGCCAACGCGCGTGAGCTGGCGTCCGTTTGCAACAGCCTCCACGCGCGCACTAATATCACGTGGAGCATTGTGCCGAACCAGAACCCGAACTTAAATCCAAGGGTCCAGTATGCTGCAGGGTGTCCGTTGCTAAGTGATTACGGCTGTAACGTCCCGGCCCAGGAGCCACACCTTGCGAACCGGTTCATGATTGAGTGGTTTTCGAACCGGGGTGGTTCGGCCGGGCCGAATCGGAGGCTGTGTTCACATTTGGGTTGTGGAAGGCCTGAAACGAGGAAGAGAGAGTTTCGGAGATGTTCGGTTTGTGGAGTGGTTAATTATTGCTCACGCGCTTGCCAAGCACTTGACTGGAAGAGTCGGCATAAAGTGGAGTGTGCTCCTGTTGAGAGGTGGATCGACGATGACGACGGTGAAGACGGCGGTGAGGTGGCAGTGGTGGATAGTTAG 1230 0.5146 MRTRRGGLSYPPLLPLSTMCSNKALSERSSFNTLTPRPNRNRNNKMPSSQQQFVIRKRHKTLSLLSSSSSDTTTTTVGGSELLEILPDDLLLSILAKLSSSSNSPSDFIRVLLTCKRLNTLGLHSMVLSKASQKTFSVKARSWSESSHRFLKRCADAGNIEACYTLGMIRFYCLEHRESGRSLISKAAMRCHAPALYSLAVLQFNGSGASKDDKDLRGGVALCARAAFLGHVDALRELGHCLQDGYGVKQNVMEGRRFLVQANARELASVCNSLHARTNITWSIVPNQNPNLNPRVQYAAGCPLLSDYGCNVPAQEPHLANRFMIEWFSNRGGSAGPNRRLCSHLGCGRPETRKREFRRCSVCGVVNYCSRACQALDWKSRHKVECAPVERWIDDDDGEDGGEVAVVDS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0959 409 MobiDBLite consensus disorder prediction 27 51 - -
Ahy20g0959 409 Pfam MYND finger 347 386 IPR002893 -
Ahy20g0959 409 Gene3D Tetratricopeptide repeat domain 124 277 IPR011990 GO:0005515
Ahy20g0959 409 SUPERFAMILY HCP-like 147 264 - -
Ahy20g0959 409 Gene3D - 332 390 - -
Ahy20g0959 409 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 78 403 - -
Ahy20g0959 409 ProSiteProfiles Zinc finger MYND-type profile. 344 386 IPR002893 -
Ahy20g0959 409 PANTHER MYND DOMAIN-CONTAINING 78 403 IPR044508 -
Ahy20g0959 409 SUPERFAMILY HIT/MYND zinc finger-like 341 391 - -
Ahy20g0959 409 SUPERFAMILY F-box domain 78 142 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0959 Ahy-Chr20 13559270 13561115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0959 - - adu:107468872 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0959 20 13559270 13561115 Ahy20g0959 20 13559270 13561115 ECH
Ahy20g0959 20 13559270 13561115 Ahy10g0675 10 7324101 7325991 hybridization
Ahy20g0959 20 13559270 13561115 Ahy13g4477 13 144939340 144941211 PCT
Ahy20g0959 20 13559270 13561115 Ahy3g4194 3 141926730 141928580 PCT
Ahy13g4477 13 144939340 144941211 Ahy20g0959 20 13559270 13561115 PCT
Ahy3g4194 3 141926730 141928580 Ahy20g0959 20 13559270 13561115 PCT