Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0675 ATGAGAACCAGAAGAGGAGGCCTCTCTTATCCTCCACTTCTACCCTTATCCACCATGTGTTCCAACAAAGCTCTTTCAGAAAGGTCCTCTTTCAACACACTCACACCACTCCCCAATAGAAACAGAAACAACAAAATGCCTTCTTCGCAACAACAATTCGTTAGCCGTAAAAGGCACAAGACATTATCATTATTATCATCTTCCTCTTCCGACACAACAACAACAACAGTCGGAGGCTCCGAACTCTTGGAGACCTTGCCGGATGACATTCTCCTCTCAATCCTCGCGAAACTTAGTTCGTCCTCCAATTCTCCTTCCGATTTCATCCGTGTTCTTTTGACGTGTAAAAGGCTGAACAGGTTGGGTCTTCACTCAGTGGTTCTATCAAAAGCATCCCAAAAAACATTCTCAGTCAAAGCCAGAAACTGGTCAGAATCTTCTCACCGCTTCCTCAAACGTTGCGCTGATGCCGGAAACATCGAAGCATGCTACACTCTTGGAATGATTCGGTTCTACTGTTTAGGAAACCGTGAGAGTGGAAGGTCGCTTATATCGAAGGCGGCGATGAGGTGTCACGCGCCGGCACTTTACTCTCTGGCCGTTATACAGTTCAATGGGAGCGGAGCCTCGAAGGACGACAAGGACCTAAGGGGCGGTGTGGCTCTTTGCGCACGCGCCGCATTCCTCGGCCACGTCGACGCGCTGCGCGAGTTGGGTCATTGCTTGCAAGACGGTTACGGAGTTAAGCGAAACGTTATGGAAGGGCGACGGTTTCTCGTTCAAGCCAACGCGCGTGAGCTGGTGTCCGTTTGCAACAGCCTCCACGCGCGCACTACTATCACGTGGGGCGTTATGCCGAACCAGAACCCGAACCTAAATCCAAGGGTCCAGTATGCTGCAGGGTGTCCGTTGCTAAGTGATTACGGCTGTAACGTCCCCGCTCAGGAGCCACACCTTGCGAACCGGTTCATGATTGAGTGGTTTTCGAACCGGGGTGGTTCGGCCGGGCCGAGTCGGAGGCTGTGTTCACATTTGGGTTGTGGAAGGCCTGAAACGAGGAAGAGAGAGTTTCGGAGATGTTCGGTTTGTGGAGTGGTTAATTATTGCTCACGCGCTTGCCAAGCACTTGACTGGAAGAGTCGGCATAAAGTGGAGTGTGCTCCTGTTGAGAGGTGGATCGACGATGACGACGGTGAAGATGGCGGTGAAGTGGCAGTGGTGGATAGTTAG 1230 0.5163 MRTRRGGLSYPPLLPLSTMCSNKALSERSSFNTLTPLPNRNRNNKMPSSQQQFVSRKRHKTLSLLSSSSSDTTTTTVGGSELLETLPDDILLSILAKLSSSSNSPSDFIRVLLTCKRLNRLGLHSVVLSKASQKTFSVKARNWSESSHRFLKRCADAGNIEACYTLGMIRFYCLGNRESGRSLISKAAMRCHAPALYSLAVIQFNGSGASKDDKDLRGGVALCARAAFLGHVDALRELGHCLQDGYGVKRNVMEGRRFLVQANARELVSVCNSLHARTTITWGVMPNQNPNLNPRVQYAAGCPLLSDYGCNVPAQEPHLANRFMIEWFSNRGGSAGPSRRLCSHLGCGRPETRKREFRRCSVCGVVNYCSRACQALDWKSRHKVECAPVERWIDDDDGEDGGEVAVVDS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0675 409 SUPERFAMILY HIT/MYND zinc finger-like 341 391 - -
Ahy10g0675 409 MobiDBLite consensus disorder prediction 31 54 - -
Ahy10g0675 409 Pfam MYND finger 347 386 IPR002893 -
Ahy10g0675 409 PANTHER MYND DOMAIN-CONTAINING 78 403 IPR044508 -
Ahy10g0675 409 ProSiteProfiles Zinc finger MYND-type profile. 344 386 IPR002893 -
Ahy10g0675 409 SUPERFAMILY HCP-like 147 263 - -
Ahy10g0675 409 Gene3D - 331 390 - -
Ahy10g0675 409 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 78 403 - -
Ahy10g0675 409 SUPERFAMILY F-box domain 78 139 IPR036047 GO:0005515
Ahy10g0675 409 Gene3D Tetratricopeptide repeat domain 124 276 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0675 Ahy-Chr10 7324101 7325991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0675 - - adu:107468872 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0959 20 13559270 13561115 Ahy10g0675 10 7324101 7325991 hybridization
Ahy10g0675 10 7324101 7325991 Ahy13g4477 13 144939340 144941211 PCT
Ahy10g0675 10 7324101 7325991 Ahy3g4194 3 141926730 141928580 PCT
Ahy13g4477 13 144939340 144941211 Ahy10g0675 10 7324101 7325991 PCT
Ahy3g4194 3 141926730 141928580 Ahy10g0675 10 7324101 7325991 PCT