Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0348 ATGTCCACCGCCCAACTGCAAAACGACTTCTCTTCAGCTCAACCCTCATCATCTTCTAGACCCGCAGCCGATCAACATCACCACCCCCAGCCGCCTCAACACGCGTCTTCTGCAACCGTGGCGGCTCCTTTGAGCCGCTACGAGTCACAAAAGAAGCGAGACTGGAACACGTTCGGGCAGTATCTGAAGAATCAGACACCGCCGGTGTCCCTGTCTCAGTGCAATTTCAACCACGTGCTCGAATTCCTCCGTTACCTTGACCAATTTGGCAAGACTAAGGTTCACATGAACGGTTGCATCTTTTTTGGGCAGCCTGACCCTCCGGCCCCGTGCACCTGCCCTCTCAGGCAGGCGTGGGGTAGCCTAGACGCCCTCATAGGGCGTCTGAGAGCTGCCTACGAGGAGCACGGAGGCTCCCCGGAGTCAAACCCCTTCGGAAGCGGAGCTATTAGGGTGTACCTTCGTGAGGTGAAGGAGTGCCAGGCAAAGGCAAGAGGGATCCCTTACACCAAGAAGAAGAAGAAGAGGAGCAGCCAGATTAAGGGGATTAGCAATCACGACACTACTGCCTCAAAGTCTTTGAAGCAATTGGCTTCTTGA 600 0.5517 MSTAQLQNDFSSAQPSSSSRPAADQHHHPQPPQHASSATVAAPLSRYESQKKRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMNGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRSSQIKGISNHDTTASKSLKQLAS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0348 199 MobiDBLite consensus disorder prediction 1 46 - -
Ahy20g0348 199 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 15 186 - -
Ahy20g0348 199 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Ahy20g0348 199 MobiDBLite consensus disorder prediction 165 199 - -
Ahy20g0348 199 Pfam ALOG domain 41 159 IPR006936 -
Ahy20g0348 199 PANTHER PROTEIN G1-LIKE2 15 186 IPR040222 -
Ahy20g0348 199 MobiDBLite consensus disorder prediction 1 44 - -
Ahy20g0348 199 MobiDBLite consensus disorder prediction 182 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0348 Ahy-Chr20 3631609 3636760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0348 - - gmx:100306082 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0348 20 3631609 3636760 Ahy20g0348 20 3631609 3636760 ECH
Ahy20g0348 20 3631609 3636760 Ahy18g1479 18 29707604 29710766 ECH
Ahy18g1479 18 29707604 29710766 Ahy20g0348 20 3631609 3636760 ECH
Ahy13g4202 13 141564849 141566226 Ahy20g0348 20 3631609 3636760 ECH
Ahy20g0348 20 3631609 3636760 Ahy10g0159 10 1536563 1541033 hybridization