Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0159 ATGTCCACCGCCCAACTGCAAAACGACTTCTCTTCAGCTCAACCCTCATCATCTTCTAGACCCGCAGCCGATCAACATCACCACCAGCCTCCTCAACACGCGTCTTCTGCGGCCGTGGCGGCTCCTTTGAGCCGCTACGAGTCACAAAAGAAGCGAGACTGGAACACGTTCGGACAGTATCTGAAGAATCAGACACCGCCGGTGTCCCTGTCTCAGTGCAATTTCAACCACGTGCTCGAATTCCTCCGTTACCTTGACCAATTTGGCAAGACTAAGGTTCACATGAACGGTTGCATCTTTTTTGGGCAGCCTGACCCTCCGGCCCCGTGCACCTGCCCTCTCAGGCAGGCGTGGGGTAGCCTAGACGCCCTCATAGGGCGTCTGAGAGCTGCCTACGAGGAGCACGGAGGCTCCCCGGAGTCGAACCCCTTCGGAAGCGGAGCTATTAGGGTGTACCTTCGTGAGGTGAAGGAGTGCCAGGCAAAGGCAAGAGGGATCCCTTACACCAAGAAGAAGAAGAAGAGGAGCAGCCAGATTAAGGGGATTAGCAATCACGACACTGCCTCAAAGTCTTTGAAGCAATTGGCTTCTTGA 594 0.5522 MSTAQLQNDFSSAQPSSSSRPAADQHHHQPPQHASSAAVAAPLSRYESQKKRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMNGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRSSQIKGISNHDTASKSLKQLAS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0159 197 MobiDBLite consensus disorder prediction 164 197 - -
Ahy10g0159 197 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 15 184 - -
Ahy10g0159 197 MobiDBLite consensus disorder prediction 181 197 - -
Ahy10g0159 197 ProSiteProfiles ALOG domain profile. 45 172 IPR006936 -
Ahy10g0159 197 Pfam ALOG domain 40 158 IPR006936 -
Ahy10g0159 197 MobiDBLite consensus disorder prediction 1 42 - -
Ahy10g0159 197 MobiDBLite consensus disorder prediction 1 32 - -
Ahy10g0159 197 PANTHER PROTEIN G1-LIKE2 15 184 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0159 Ahy-Chr10 1536563 1541033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0159 - - gmx:100306082 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0348 20 3631609 3636760 Ahy10g0159 10 1536563 1541033 hybridization