Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1479 ATGTCCACAAGCAAAGGGAAAGATATAGTAGAGGGATCGTCAAGATCTCCTACTCATGATGGTGGTGCTAGTGATGATCGGATTCAACCGCAACATCAGTTGCCGTTGAGCCGATATGAGTCCCAAAAGAAGAGGGATTGGAACACTTTCGGCCAATACCTTAGGAACCAACGGCCTCCAGTGCCGCTTTCTCAGTGCAACTCCAGCCATGTCCTTGAATTTCTAAGGTATTTAGATCAATTCGGAAAAACAAAGGTACACTCACAAGGTTGCTTGTTTTTCGGGCAGACCGAACCACCAGGACCTTGCACATGCCCTCTCAAACAAGCCTGGGGGAGCCTTGACGCTCTCATAGGCCGATTGAGAGCGGCATATGAGGAAAATGGAGGTCTACCCGAGACAAACCCATTTGCCAGTGGAGCCATAAGAGTTTACCTACGAGAGGTTAGGGACTCACAAGCCAAAGCAAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGAAATCTAATCAATAATAAGGCCAACGGTGACACCGCTACTACCTCAAGCTTACCAGCTTTGCAGTAA 570 0.4719 MSTSKGKDIVEGSSRSPTHDGGASDDRIQPQHQLPLSRYESQKKRDWNTFGQYLRNQRPPVPLSQCNSSHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLINNKANGDTATTSSLPALQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1479 189 Pfam ALOG domain 33 151 IPR006936 -
Ahy18g1479 189 PANTHER PROTEIN G1-LIKE2 2 180 IPR040222 -
Ahy18g1479 189 MobiDBLite consensus disorder prediction 1 41 - -
Ahy18g1479 189 MobiDBLite consensus disorder prediction 161 189 - -
Ahy18g1479 189 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
Ahy18g1479 189 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 180 - -
Ahy18g1479 189 MobiDBLite consensus disorder prediction 173 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1479 Ahy-Chr18 29707604 29710766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1479 - - gmx:100806493 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0348 20 3631609 3636760 Ahy18g1479 18 29707604 29710766 ECH
Ahy13g4202 13 141564849 141566226 Ahy18g1479 18 29707604 29710766 ECH
Ahy18g1479 18 29707604 29710766 Ahy20g0348 20 3631609 3636760 ECH
Ahy18g1479 18 29707604 29710766 Ahy18g1479 18 29707604 29710766 ECH