Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4202 ATGTCTGCCGCAGTGGCCGCAGCAGCCGCTTCCGCCGCAATCTCCGGCTACCACAGCTCCTCTGGCGCCGACACCAGGAACCACCACCCGTTTACGCAACCAGAACACGGGCAACAAGTCTCCGTCCCTCTTAGCAGGTACGAGTCTCAAAAGAGGCGTGACTGGAACACGTTTGGGCAGTACCTGAAGAACCACCGTCCACCGTTAACACTGTCCCGGTGCAGCGGCGCGCACGTGCTGGAATTCCTGCGGTACTTGGACCAGTTTGGGAAGACGAAGGTGCACAGCGACACGTGTGCGTACTTTGGGAACTCTCAGCCTCCGGGGCCATGCCCGTGTCCGTTGAAGCAAGCTTGGGGAAGCCTTGATGCACTGATTGGGCGGCTGCGTGCGGCGTTTGAAGAAAACGGAGGAAACCCTGAGATGAACCCTTTCGGTGCACGCGCCGTCAGGCTTTACCTCCGTGAAGTTCGGGATGTGCAAGCCAAGGCTAGAGGTATTGCTTATGAGAAGAAGAAACGCAGAAAGAATAGTAATCATAGCCAGAATCAGAATCAGAATCAGAATGGGTCGATGATGATGATGATGGAAGATAACAACAACAATACTAATAATAACCATGGTCATTATGTTCATGATGATGTGAGTTCTAGTGGGGTGCATCATTCATCAGGGTATAATATTAATGGTGGTGGTGGAGTTTTTCATCACTTGTCAAGTTCGGATGGGACAGCTCCTCCTCTTTCATATTTCTTATCCTAG 762 0.5197 MSAAVAAAAASAAISGYHSSSGADTRNHHPFTQPEHGQQVSVPLSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHSDTCAYFGNSQPPGPCPCPLKQAWGSLDALIGRLRAAFEENGGNPEMNPFGARAVRLYLREVRDVQAKARGIAYEKKKRRKNSNHSQNQNQNQNGSMMMMMEDNNNNTNNNHGHYVHDDVSSSGVHHSSGYNINGGGGVFHHLSSSDGTAPPLSYFLS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4202 253 MobiDBLite consensus disorder prediction 17 46 - -
Ahy13g4202 253 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Ahy13g4202 253 PANTHER PROTEIN G1-LIKE2 1 204 IPR040222 -
Ahy13g4202 253 MobiDBLite consensus disorder prediction 180 209 - -
Ahy13g4202 253 MobiDBLite consensus disorder prediction 167 209 - -
Ahy13g4202 253 Pfam ALOG domain 42 159 IPR006936 -
Ahy13g4202 253 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4202 Ahy-Chr13 141564849 141566226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4202 - - adu:107481719 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4202 13 141564849 141566226 Ahy18g1479 18 29707604 29710766 ECH
Ahy13g4202 13 141564849 141566226 Ahy13g4202 13 141564849 141566226 ECH
Ahy13g4202 13 141564849 141566226 Ahy20g0348 20 3631609 3636760 ECH
Ahy13g4202 13 141564849 141566226 Ahy3g3930 3 138654887 138656138 hybridization