Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1902 ATGCCACCAGCTATGGTGCTTTCGCCATTGCCGGAATCCCCGTCGGTGCTGTCAGTTCCGGAATCCCCATCGGAGACTCGTCGATTCGGAGATATCAGAGGTTTGCAGTGGCGTATCAGTCTCGGGGTTTTGCCTTCTTCGAATTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGAGATATGCCAATTTGAGAGGTCGCCTCCTGGTTGATCCCCATCTTCCAAAAGATGGAGGTAGTCCACCCAATCTTATCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCTGAGCTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGGGGCTACTTCCAGACACCAGGATTCCAAGGCTTATTGAGACGGATTTTATTGCTATGGTGTCTCAAACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAGTTACTTGCCCCGCTGCTATATGTTCTCCAAGTTGATGTGGAACATCTTTCCGCAATACGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGCCTTTTCTGTCAGGAGAATGATCATCGTTACAGCTTTGATATGAGAAAATCTACAGACTCAGAGGATGATATTGGTTCCTGTGGAGATGCATTGAAAATCCAGAGTCTCGATGAGCTTGACCCTAATATACGAGCGCTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTTGGTGTTGTTTTGTCCGATAAATTCATGGAACACGATGCTTACTGCATGTTTGAGGCATTAATGAGTGGTGCTCATGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCACCTGTGGCTGGGTCCAATACTGGCTTGCCTCCTGTAATTGAAGCTTCAAATGCATTGTATCATTTGTTGTATCACGTTGATTCATCTCTACACAGTCATCTTGTTGATCTTGGGGTTGAACCCCAGTACTTTGCTCTTCGCTGGTTCCGAGTTTTATTTGGACGGGAATTTTCACTGGACAACCTCTTGATCATCTGGGATGAGATATTTTTATCAGATAATAGTAAAAAGCAGAAGCTTGCTGAGGACACTACAGAATCTGGTTTTATGATATTACAATCACCTCGTGGAGCCTTTATCACGGCTATGGCTGTAGCAATGTTACTTCGATTAAGATCTTCACTACTGGCAACTGAAAATCCCACAATCTGTCTTCAGAGGTTATTAAACTTCCCCGGGGACACAGATATTGATAAACTACTAGCAAAGGCTAAATCCTTGCAGGATATTGCATTAAGTACTGAAATTTCATCATCAATACCTTCATTTGTGTGGTTTCATAACCAAGCAAAATCAATTAGTCAAAGATCTACGACTCATGCATCTGACTCAGATTCTCCGAGAACTCCTCTGAAACTGTTGACTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAGTACCGAAGAACTTAAGCAAGATGGAGCCGAAAATCAGGTTCCAGCTCAGAAAAAGAAATGGACAGAAAAGGTAAATGTCAGTTTAAAGAGAACAGAATCTGCCCCTTCTCCATCCACGACTAATGATGGTAAAAAGGAAAATAAGGAAGCTGTTAGACGCAGTTTGTTAGAAGATCTTTGTAAGGAACTTGGCTCAGAGGTAGATACAGAAAACCTGTATGTATTCGAGCAGGATAATCGTCCTGTAGTAGTTGAAAGGGAACAACAAGATGACGGCTCTGAATGCTGCAACAATTACTTTGCAGATGTTAGAGGTCTAAGTGTAAGTACTAGAAGTGAGGGAAATTCACCTATATTTTCTGGCCTAGCTAGTCCTCGTTTGGATGTCAATCGTCGAAACTATTCTGAGAAAAGTAGCATTCCGTATAATTATAATTTGTCCTTTCTTGAAACTGAAATCAATGAAACTGGTTCACCTCTTCCAGTCTCTGATTGTCCTGAGAACTTATCTCACACATCCTCCTTCAACAATGATCCTTTGGGAAATTCAGCCTCACATCCTAAGTGGGGAAAGCTGAATAAATTCCAGTGGTTTTTTTCAAGGCTTGGACGAAACAGTGATGAACGTACATCTGTCGAGGGTGGAAGTCCTTCTCAAGATGCAAAACCTGCCAAATGCGAAAATCAAAGTCATGTAATGATACCCTCTTCTTCTATAGCAAATGGGCATTGTAGTCCTGTTAGAAGCCAAGGGGATTCTCCGATAGACCAGAATATGGTAGGAACTATTAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTTTCCAACAAGAACAGGGAGCTTCGAAAGATGTTGTGGTTGGTAAAGGGCAGCTTGCTGCCATGACAGCAGCTCTGGATGAACTTCGAAAAATTAGTAATCTTTTGTCTGAGATGTGA 2448 0.4248 MPPAMVLSPLPESPSVLSVPESPSETRRFGDIRGLQWRISLGVLPSSNSIDDLRRATANSRRRYANLRGRLLVDPHLPKDGGSPPNLIMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGGYFQTPGFQGLLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVEHLSAIRKLYEDHFTDRFDGLFCQENDHRYSFDMRKSTDSEDDIGSCGDALKIQSLDELDPNIRALVLLGDAYGAEGELGVVLSDKFMEHDAYCMFEALMSGAHGSVAMADFFSYSPVAGSNTGLPPVIEASNALYHLLYHVDSSLHSHLVDLGVEPQYFALRWFRVLFGREFSLDNLLIIWDEIFLSDNSKKQKLAEDTTESGFMILQSPRGAFITAMAVAMLLRLRSSLLATENPTICLQRLLNFPGDTDIDKLLAKAKSLQDIALSTEISSSIPSFVWFHNQAKSISQRSTTHASDSDSPRTPLKLLTDSYWEEKWRVAHSTEELKQDGAENQVPAQKKKWTEKVNVSLKRTESAPSPSTTNDGKKENKEAVRRSLLEDLCKELGSEVDTENLYVFEQDNRPVVVEREQQDDGSECCNNYFADVRGLSVSTRSEGNSPIFSGLASPRLDVNRRNYSEKSSIPYNYNLSFLETEINETGSPLPVSDCPENLSHTSSFNNDPLGNSASHPKWGKLNKFQWFFSRLGRNSDERTSVEGGSPSQDAKPAKCENQSHVMIPSSSIANGHCSPVRSQGDSPIDQNMVGTIRNIGQSMLEHIQVIESSFQQEQGASKDVVVGKGQLAAMTAALDELRKISNLLSEM* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1902 815 MobiDBLite consensus disorder prediction 499 545 - -
Ahy1g1902 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 322 IPR035969 -
Ahy1g1902 815 SMART tbc_4 24 408 IPR000195 -
Ahy1g1902 815 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 279 - -
Ahy1g1902 815 MobiDBLite consensus disorder prediction 1 25 - -
Ahy1g1902 815 Pfam Rab-GTPase-TBC domain 259 363 IPR000195 -
Ahy1g1902 815 Pfam Rab-GTPase-TBC domain 111 191 IPR000195 -
Ahy1g1902 815 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 14 730 - -
Ahy1g1902 815 MobiDBLite consensus disorder prediction 703 723 - -
Ahy1g1902 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 297 437 IPR035969 -
Ahy1g1902 815 MobiDBLite consensus disorder prediction 524 538 - -
Ahy1g1902 815 Gene3D - 301 445 - -
Ahy1g1902 815 ProSiteProfiles TBC/rab GAP domain profile. 27 362 IPR000195 -
Ahy1g1902 815 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 14 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1902 Ahy-Chr1 95660630 95665567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1902 K18469 - gmx:100816501 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3071 11 148371057 148375845 Ahy1g1902 1 95660630 95665567 hybridization
Ahy1g1902 1 95660630 95665567 Ahy14g1273 14 29398354 29402806 PCT
Ahy1g1902 1 95660630 95665567 Ahy4g1183 4 31737815 31742270 PCT
Ahy14g1273 14 29398354 29402806 Ahy1g1902 1 95660630 95665567 PCT
Ahy4g1183 4 31737815 31742270 Ahy1g1902 1 95660630 95665567 PCT