Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1273 ATGCCGCCGGCTCTGATGAACCCGCTGATGCCGCCGCCGCCACCTCCGTCGGTGTCGGTGTCCGCGCCGCCGGAGCTTGAAGGCTCCGACGATGTTTCCGGGAGATCGGTGACTCAAAAGAGGCGATTCGGTGATCTGAGAGGGTTGCAGTGGCGTGTTGATCTTGGGGTTTTGCCTTCAGAGTCTTCAACTTCCATTGATGATCTTCGTAGGGTCACCGCTGACTGTAGAAGGAGGTATGCGAATCTGAGAAGGCGTCTTCTGGTTGAACCGCATATCCCGAAGGATGGAAGTAACTCACCCGATCTTACCATGGATAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGTAATGCGGAGCTAGAGAGAATGGTTGATCAGGATTTATCACGTTTATATCCAGAACATGGGAATTATTTCCAGACACCAGGATGCCAAGGCATTTTAAGACGCATTTTATTACTTTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCACGAGTTACTTGCTCCTCTACTTTATGTTCTCCAAGTTGATGTGGAGCGTCTTTCAGAAGTTCGAAAGCTTTATGAAGATATCTTCACCGACAAATTTGATGGCCTTCTATATCAGGAGAATGATCTTTCTTACAGCTTTGATTTTAGAAAATCTCAAGACTTGCTGGAGGATGAAATTGGCTCTCATGGAAATGCAAAAGTCAAAAGTCTTGATGAGCTTGATCCTGCATTACAGACCATTGTATTGCTGAGTGATGCTTATGGAGCTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTCATGGAACATGATGCTTATTGCATGTTTGATGCTTTAATGAGTGGTGTCCGTGGTTCAGTTGCGATGGCCGATTTCTTCTCTTCCTTCCCTGTAGCAGGGTCGCAAACTGGCCTGCCTCCTGTTATTGAAGCTTCTACTGCATTGTATCATTTGCTGTGTCTTGTGGATTCATCTCTGTATAGCCATCTTTTGGATCTTGGTGTTGAACCCCAATACTTTTCTCTCCGATGGTTGCGAGTTCTATTCGGACGTGAGTTTTCACTTGACAATCTATTGATAATCTGGGATGAGATCTTTGCATCGGATAATAGTAAAGTTGAAAAAAGTGTTGATGACAACATAGACTGGGGTTTGAGGATTTTGCATTCTCCTCGTGGAGCATTTATTGCAGCTATGGCTGTTGCAATGCTACTTCATTTAAGATCTTCACTGCTTGCTACCGAAAATCCTACCACCTGTCTTCAGAGATTATTAAACTTTCCTGAAAACATTAATATTAAAAAGCTGCTGGAGAAGGCCAAATCATTGCAAGCTCGTGCACTAAGTGTTGATATTTCTTCTCCATCACCTTTGATTATAGGATATCATCTCCAAAGTAAATCAGTTATGACGCGATCTCAGACCCTTCCTTCTGAAACTGTGTCTCCAAAAACTCCTGTAAATTTGTTAACTGACAGCTACTGGGAAGAAAAATGGAGGGTTGCACATGAGGCTGAAGAACTTAAGCAAGATGGTATCGAACAACAGATTCCGACTCGGAAAAAGGGCTGGACAGAAAAGGTAAAAAACACACTGAGAAGAGCGGGATCTGATCCACCACCTTCAAGGATTAAGAATGGCAAAAAGGAATCTAAGGTGGTTAGGCGAAACATATTGGAAGCGCTTCATAAGGCACTTGGACCTGAGGAAGAAGCAGAACAAATGGATTGCCATGAAATCCTATGCAAGCAGGAAAATATTTCTGAAGCAGCTGAAGGTGTGCAGCAAAATGATAACTCTAAAGGCGACAACAGTTACTCATCTGATGATAGATGTCCAAGTGGAAATACAGGGATAGAGGAAAGCTCCTCTGTATATTCTGACTCAACTAGCCCGCCTAATGAGGCCAATTATCATGAAATTACCTCGCAGGGAAGTAGTGTTGCCTCTAATTTATATCTTGACGAATGCGATGAAACTGCAGATACCAGTCTCAGTGATCCACCTCTTCCAGTCTCTGATCATCCTGAGAGCATACCTGAAACATCAGAGTCCACTGATGTTGATGTTGATAAATCTGAGAACATACCTCAGATGTCAGGGTGCAATAATAATGATCCAGGAAATTCTGCTACACATCCCAAGGAGAAAAAGCAGAATAAATTTCAGTGGTTTTGGAAGTTTGGACGGAATACCGTTGAGGGTATATCGGGGAAAGTAGGAGCTGCTTCTGAACCTACAAAATCCACCAGCAGCTGTAGTAACCAAAGTAATTCGCAACCACCTGTCTCTTCTACCACCAGTGAGCATTTCACTTCTGTTAGTAGCAAAGGAGATTCTGTAGACCAGAATGTGATGGGCACTTTGAAGAATATTGGACAGTCTATGCTTGACCATATCCAGGTAATTGAATCTGTTTTCCAACAAGACAGGAACCAGGGAGTCTCAGTGGAGAACTTATCTAAAAATATTCTTGTTGGCAAAGGGCAGGTTACTGCCATGGCAGCTCTCAAGGAGCTTCGGAAGATTAGCAATATTCTGTCTGAGATGTGA 2580 0.4337 MPPALMNPLMPPPPPPSVSVSAPPELEGSDDVSGRSVTQKRRFGDLRGLQWRVDLGVLPSESSTSIDDLRRVTADCRRRYANLRRRLLVEPHIPKDGSNSPDLTMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGNYFQTPGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVERLSEVRKLYEDIFTDKFDGLLYQENDLSYSFDFRKSQDLLEDEIGSHGNAKVKSLDELDPALQTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMSGVRGSVAMADFFSSFPVAGSQTGLPPVIEASTALYHLLCLVDSSLYSHLLDLGVEPQYFSLRWLRVLFGREFSLDNLLIIWDEIFASDNSKVEKSVDDNIDWGLRILHSPRGAFIAAMAVAMLLHLRSSLLATENPTTCLQRLLNFPENINIKKLLEKAKSLQARALSVDISSPSPLIIGYHLQSKSVMTRSQTLPSETVSPKTPVNLLTDSYWEEKWRVAHEAEELKQDGIEQQIPTRKKGWTEKVKNTLRRAGSDPPPSRIKNGKKESKVVRRNILEALHKALGPEEEAEQMDCHEILCKQENISEAAEGVQQNDNSKGDNSYSSDDRCPSGNTGIEESSSVYSDSTSPPNEANYHEITSQGSSVASNLYLDECDETADTSLSDPPLPVSDHPESIPETSESTDVDVDKSENIPQMSGCNNNDPGNSATHPKEKKQNKFQWFWKFGRNTVEGISGKVGAASEPTKSTSSCSNQSNSQPPVSSTTSEHFTSVSSKGDSVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRNQGVSVENLSKNILVGKGQVTAMAALKELRKISNILSEM* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1273 859 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 45 338 IPR035969 -
Ahy14g1273 859 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 790 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 752 791 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 749 791 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 669 725 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 601 652 - -
Ahy14g1273 859 Pfam Rab-GTPase-TBC domain 127 186 IPR000195 -
Ahy14g1273 859 Pfam Rab-GTPase-TBC domain 277 378 IPR000195 -
Ahy14g1273 859 ProSiteProfiles TBC/rab GAP domain profile. 41 378 IPR000195 -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 541 560 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 1 21 - -
Ahy14g1273 859 Coils Coil 66 86 - -
Ahy14g1273 859 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 790 - -
Ahy14g1273 859 SMART tbc_4 38 408 IPR000195 -
Ahy14g1273 859 Gene3D - 317 459 - -
Ahy14g1273 859 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 314 453 IPR035969 -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 1 39 - -
Ahy14g1273 859 MobiDBLite consensus disorder prediction 701 719 - -
Ahy14g1273 859 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 110 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1273 Ahy-Chr14 29398354 29402806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1273 K18469 - gmx:100812967 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1273 14 29398354 29402806 Ahy4g1183 4 31737815 31742270 hybridization
Ahy11g3071 11 148371057 148375845 Ahy14g1273 14 29398354 29402806 PCT
Ahy1g1902 1 95660630 95665567 Ahy14g1273 14 29398354 29402806 PCT
Ahy14g1273 14 29398354 29402806 Ahy11g3071 11 148371057 148375845 PCT
Ahy14g1273 14 29398354 29402806 Ahy1g1902 1 95660630 95665567 PCT