Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3071 ATGCCACCAGCTATGGTGCTTTCGCCATTGCCGGAATCCCCGTCGGTGCTTTCAGTTCCGGAATCTCCGCCGGAGACTCGTCGATTCGGAGATATCAGAGGTTTGCAGTGGCGTATCAGTCTCGGGGTTTTGCCTTCTTCGAATTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGAGATATGCCAATTTGAGAGGTCGCCTCCTGGTTGATCCCCATCTTCCAAAAGATGGAGGTAGTCCACCCAATCTTATCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCTGAGTTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGGGGCTACTTCCAGACACCAGGATTCCAAGGCTTATTGAGACGGATTTTATTGCTGTGGTGTCTCAAACACCCAGAATGTGGTTATAGACAAGGAATGCATGAGTTACTTGCCCCGCTGCTATATGTTCTCCAAGTTGATGTGGAACATCTTTCCGCAATACGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGCCTTTTCTGTCAGGAGAATGATCATCGTTACAGCTTTGATATGAGAAAATCTACAGACTCAGAGGATGATATTGGTTCCTGTGGAGATGCATTGAAAATCCAGAGTCTCGATGAGCTTGATCCTAGTATACGAGCGCTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTTGGTGTTGTTTTGTCCGATAAATTCATGGAACATGATGCTTACTGCATGTTTGAGGCATTAATGAGTGGTGCTCATGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCACCTGTGGCTGGGTCCAATACCGGCTTGCCTCCTGTAATTGAAGCTTCAAATGCATTGTATCATTTGTTGTATCACGTTGATTCATCTCTACACAGTCATCTTGTTGATCTTGGGGTTGAACCCCAGTACTTTGCTCTCCGCTGGTTCCGAGTTTTATTTGGACGGGAATTTTCACTCGACAACCTCTTGATCATCTGGGATGAGATATTTTTATCAGATAATGGTAAAAAGCAGAAGCTTGCGGAGGACAATACAGAATCTGGTTTTATGATATTACAATCACCTCGTGGAGCCTTTATCACGGCTATGGCTGTAGCAATGTTACTTCGATTAAGATCTTCACTACTGGCAACTGAAAATCCCACAATCTGTCTCCAGAGGTTATTAAACTTCCCCGAGGACACAGATATCGATAAACTACTAGCAAAGGCTAAATCCTTGCAGGCTATTGCATTAAGTACTGAAATTTCATCATCAATACCTTCATTTGTGTGGTTTCATAACCAAGCAAAATCAATTAGTGCAAGATCTACTACTCATCCATCTGACTCAGATTCTCCGAGAACTCCTCTGAAACTGTTGACTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAGTACTGAAGAACTTAAGCAAGATGGAGCTGAAAATCAGGTTCCAGCTCAGAAAAAGAAATGGACAGAAAAGGTAAATGTCAGTTTAAAGAGAACAGAATCTGCCCCTTCTCCATCCACGACTAATGATGGAAAAAAGGAAAGTAAGGAAGCTGTTAGACGCAGTTTGTTAGAAGATCTTTGTAAGGAACTTGGCTCAGAGGTAGACACAGAAAACCTGTATGTATTCGAGCAGGATAATCGTCCTGTAGTAGTTGAAAGGGAACAACAAGATGACGGCTCTGAATGCTGCAACAATTACTTTGCGGATGTTAGAGGTCTAAGTGTAAGTACTAGAAGTGAGGGAAATTCACCTATATTTTCTGGCCTAGCTAGTCCTCGTTTGGATGTCAATCGTCGAAACTATTCTGAGAAAAGTAGCATTCCGTATAATTATAATTTGTCCTTTCTTGAAACTGAAATCAATGAAACTGGTTCACCTCTTCCAGTCTCTGATTGTCCTGAGAACTTATCTCACACATCCTCCTTCAACAATGATCCCATGGGAAATTCAGCCTCACATCAGAAGTGGGGAAAGCTGAATAAATTCCAGTGGTTTTTTTCAAGGCTTGGACGAAACAGTGATGAACGTACATCTGTCAAGGGTGGAAGTCCTTCTCAAGATGCAAAACCTGCCAAATGCAAAAATCAAAGTCATGTAATGATACCCTCTTCTTCTATAGCAAATGGGCATTGTAGTCCTGTTAGAAGCCAAGGGGATTCTCCGATAGACCAGAATATGGTCGGAACTATTAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTTTCCAACAAGAACAGGGAGCTTCGAAAGATGTTGTGGTTGGTAAAGGGCAGCTTGCTGCCATGACAGCAGCTCTGGATGAACTTCGGAAAATTAGTAATCTTTTGTCTGAGATGTGA 2448 0.4269 MPPAMVLSPLPESPSVLSVPESPPETRRFGDIRGLQWRISLGVLPSSNSIDDLRRATANSRRRYANLRGRLLVDPHLPKDGGSPPNLIMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGGYFQTPGFQGLLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVEHLSAIRKLYEDHFTDRFDGLFCQENDHRYSFDMRKSTDSEDDIGSCGDALKIQSLDELDPSIRALVLLGDAYGAEGELGVVLSDKFMEHDAYCMFEALMSGAHGSVAMADFFSYSPVAGSNTGLPPVIEASNALYHLLYHVDSSLHSHLVDLGVEPQYFALRWFRVLFGREFSLDNLLIIWDEIFLSDNGKKQKLAEDNTESGFMILQSPRGAFITAMAVAMLLRLRSSLLATENPTICLQRLLNFPEDTDIDKLLAKAKSLQAIALSTEISSSIPSFVWFHNQAKSISARSTTHPSDSDSPRTPLKLLTDSYWEEKWRVAHSTEELKQDGAENQVPAQKKKWTEKVNVSLKRTESAPSPSTTNDGKKESKEAVRRSLLEDLCKELGSEVDTENLYVFEQDNRPVVVEREQQDDGSECCNNYFADVRGLSVSTRSEGNSPIFSGLASPRLDVNRRNYSEKSSIPYNYNLSFLETEINETGSPLPVSDCPENLSHTSSFNNDPMGNSASHQKWGKLNKFQWFFSRLGRNSDERTSVKGGSPSQDAKPAKCKNQSHVMIPSSSIANGHCSPVRSQGDSPIDQNMVGTIRNIGQSMLEHIQVIESSFQQEQGASKDVVVGKGQLAAMTAALDELRKISNLLSEM* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3071 815 MobiDBLite consensus disorder prediction 1 25 - -
Ahy11g3071 815 Gene3D - 301 445 - -
Ahy11g3071 815 SMART tbc_4 24 408 IPR000195 -
Ahy11g3071 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 322 IPR035969 -
Ahy11g3071 815 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 12 730 - -
Ahy11g3071 815 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 12 730 - -
Ahy11g3071 815 MobiDBLite consensus disorder prediction 703 725 - -
Ahy11g3071 815 Pfam Rab-GTPase-TBC domain 259 363 IPR000195 -
Ahy11g3071 815 Pfam Rab-GTPase-TBC domain 111 191 IPR000195 -
Ahy11g3071 815 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 279 - -
Ahy11g3071 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 297 437 IPR035969 -
Ahy11g3071 815 MobiDBLite consensus disorder prediction 524 538 - -
Ahy11g3071 815 ProSiteProfiles TBC/rab GAP domain profile. 27 362 IPR000195 -
Ahy11g3071 815 MobiDBLite consensus disorder prediction 499 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3071 Ahy-Chr11 148371057 148375845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3071 K18469 - gmx:100816501 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3071 11 148371057 148375845 Ahy1g1902 1 95660630 95665567 hybridization
Ahy11g3071 11 148371057 148375845 Ahy14g1273 14 29398354 29402806 PCT
Ahy11g3071 11 148371057 148375845 Ahy4g1183 4 31737815 31742270 PCT
Ahy14g1273 14 29398354 29402806 Ahy11g3071 11 148371057 148375845 PCT
Ahy4g1183 4 31737815 31742270 Ahy11g3071 11 148371057 148375845 PCT