Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1886 ATGCGCTCATCAGGACTACCTAACTGCGGCGGTTTGCAGCAGACTCTCACGGCGGAGGCTGCTTCTGTTCTCAAACACTCTCTTGTCTTGGCTCGCCGGAGAGGCCATGCTCAGCTCACTCCTCTCCACGTGGCACCCACTCTCCTCTCCCTCTCTCCCTCCTTCAAACGAGCCTGCCTCACTTCTCACCCTTCTTCTTCCTCTCAACACCTTCTCCATTGCAGAGCCCTCGAGCTTTGCTTCAATGTCGCCCTCAACAGGCTCCCCACCACTCCCTCTCCATTTCTTCACTCTTCTCTTCAACCTTCTCTCTCCAACGCCCTCGTTGCCGCCCTCAAGCGAGCTCAGGCTCACCAGCGCAGAGGCTGCGTCGAGCACCACCACCACCACCACCACCAGAACCACCAGAACCAGCCTCTTCTCGCCGTTAAGATCGAGCTTGAACACCTTACCATATCCATCCTCGATGATCCTAGCGTCAGCCGCGTCATGAGAGAAGCTGGCTTCTCCAGCACCGCCATTAAGAACAACTTGGAAGACTTGTCTAATAACTCTTCTCCACCTTCTTCTGTTTTCCATTCTTACAACGCTTCCGCTCGCGGTGGTGGTGTCTTTTCTTCTCCTTGCTCCCCTTCCGCTTCTGATAACACCACCAACCACCACCTTATCTTTTCTTCTCCGCCTAAAAAACCACCTTCCTTGCTGTACCCCTTCATCACCACCACCGCCACTGCACCATCATCTTCTTCTAAGGAGGATGATGTCAAAGCAGTTATGGATATTCTTCTAAGGACTAATCATAATAATAATAAAAAGAACAAGAAGAACGTTGTCATAGTTGGTGACTCCGTTTCGTTAACGGAAGCTCTTGTCGGAGAGATCACTGGAAGGTTTCAGAGGTCAGAGGTGCCTCATGAGTTGAAGACAACACAGTTCATCAGATTCCAACAATTCAGATCATTGAAGCACATGAAGAGAAGCGAAGTTGAGATGAAACTCATGGAACTCAAGAGGAAGGTGGATGATTCTTATAATGGCCATGGCATCATTATCTACATTGGAGACCTGAAGTGGACAGTGGAGGAAGAAGAAGAAGGGGACGACGGAGTTTGTGGCGGCGGCGGCGGTTGTTATAGCACAGTAATGGATCATGTTGTTTCGGAAATAGGCAAGTTGTTCTCTTCTACAACAACTGAATGTGGGGAAACAACAAAAAAAGTGTGGCTAATTGCAACAGCAACATATCAGACATACATCAGGTGTCAAATGAGACAACCCCCTCTTGAGATTCAATGGTCTCTTCACCCTCTTCTTCTTCCTTCACCTGGACTTGCCTTGACTCTCTATTCTTCCAGTGTAATAGAAACAAAGCTCAATTGCTGTGAAGAATGTGCCTCAAATTATGAAAAGGAATCTCAATTTCTCAGACCAGGCCACAAGAAAACGTTACCTTTATGGCTTCAGCCTCATACCACCGAAACAAATCATCAGAAGGATGAATTAACCGAGTTGAAAAGAAAATGGAATAGGCTATGCCAGTGTCTTCACCAAACCAAACAAGAAGCTCAGGATTATTGGAGCAACAACAATAGTTGGAATGCAAAGTCCTACACTTTTAACAATAATTCATCAAGTTCTGTGTCTTTTACAGCTAAACCAACACCAACACATAGCTCCAATCTTGTACCAAGATTCAGGCGTCAAAATTCATGCACCATTGAGTTCAATTTCAGCGATAAAAGGCAAGCAACAACAGAACCAGTCTTAGGTTTCATGGAATTATTGGAAGGTAAAGAAGTAATAAAGACTACTCTTGCTCTTGGGAATGGTGGTTCTGGTTCAGGTAGTGAAACGGTGGTGGTGGAAAATATAACCGATAGAACACTGCGAAGAGCTCATTTTTGTAAACTGTTGCAGGAGAATTTGCCATGGCACTCTGAGACTGTTCCTTCCATAGCAGAGGCCTTGCTTCATTCTAAATCCGCAAAACAAAGTAACATCACTTTGTTGTTCTTGCAAGGAAATGACAAAGTTGGCAAAACAAGGTTGGCACTTGCTGTTAAAGAATCACTTTTTGGCTCAGAAGACAACAAGTTTCTTCACATGGACATGCTGAAGGAGAAAGTGGCTTCCATGGCTTCACATTCTGAGATGCTGGTTCAAGCATTGAAATACCATCATCAAAAACTTGTGCTGATTGAAAATGTTGACTTTGCTGATGCCCAGTTCAGGAAATGCATCTCTGATGGATTTGAAACGGGAAAGTTTGGAAATTTAAGAATAGCTGAAGAGAATTCATCAAGCCAAGTAGTGTTCATATTGACAAGTGGTGGATTCACAAGCAATAATGAAGAGAAAAATCAGGACTTTGTGATGAGTTTTATGTTGCAGGTCAGTGAAACCAAGCCTAATAACTTGGAGCCACCAATTTTTTGCCACAAGCGCAGGGCTGAGCTGGATTTGTTTTCCAAGATCAAGAGACCAAGAATTGAAGAGAATAATGAAGATACATCCTTGGTTCATGAACAATGTAGTAGCAGAAAAAAGGACTTATCAAGAAACTCAAGCTTTAACACCCTTGATCTCAACATGAAAGCTGATGAAGATGATGATGACAAAACAGGAGAGAGTAGCCCAATTTCAAGTGATTTGACTCTTGAAACTGCGGCTGATCCACTGAACCCAAATGGATTTCTTGATTCCATTCAGAACAAGTTTGAACTCAACACAAGTCCAGCTAGGGAGAGGGAAAAGTCAGAGATGTTCTTAACTAAGATCAAAGGGTGTTTTGAGGATGCTTGTGGGAAGCAGAATCTGGTGAATTTTAGTGTAGATGAGAGGGTAATTGAGGAAATTTGTAATAGGTGTGGTTATTTTACTAACAGCCAATTTGATAAATGGCTGAAAGAAATTTTTCAAAGAAGCTTGTTAGAAAGAGTTAAGTATGGAGGGGGGGAAGAGAAGGGTATACTTTTTAGACTTTGTTGGAGTGGTAATGGTAAAGGAGATAATAGAAAATTGGATAGGAATGAGGGGTTTATGGGTTCATCTCTGCCAAAGTGTGTTCAAGTTAATTACTTGATGAGGTGA 3090 0.4353 MRSSGLPNCGGLQQTLTAEAASVLKHSLVLARRRGHAQLTPLHVAPTLLSLSPSFKRACLTSHPSSSSQHLLHCRALELCFNVALNRLPTTPSPFLHSSLQPSLSNALVAALKRAQAHQRRGCVEHHHHHHHQNHQNQPLLAVKIELEHLTISILDDPSVSRVMREAGFSSTAIKNNLEDLSNNSSPPSSVFHSYNASARGGGVFSSPCSPSASDNTTNHHLIFSSPPKKPPSLLYPFITTTATAPSSSSKEDDVKAVMDILLRTNHNNNKKNKKNVVIVGDSVSLTEALVGEITGRFQRSEVPHELKTTQFIRFQQFRSLKHMKRSEVEMKLMELKRKVDDSYNGHGIIIYIGDLKWTVEEEEEGDDGVCGGGGGCYSTVMDHVVSEIGKLFSSTTTECGETTKKVWLIATATYQTYIRCQMRQPPLEIQWSLHPLLLPSPGLALTLYSSSVIETKLNCCEECASNYEKESQFLRPGHKKTLPLWLQPHTTETNHQKDELTELKRKWNRLCQCLHQTKQEAQDYWSNNNSWNAKSYTFNNNSSSSVSFTAKPTPTHSSNLVPRFRRQNSCTIEFNFSDKRQATTEPVLGFMELLEGKEVIKTTLALGNGGSGSGSETVVVENITDRTLRRAHFCKLLQENLPWHSETVPSIAEALLHSKSAKQSNITLLFLQGNDKVGKTRLALAVKESLFGSEDNKFLHMDMLKEKVASMASHSEMLVQALKYHHQKLVLIENVDFADAQFRKCISDGFETGKFGNLRIAEENSSSQVVFILTSGGFTSNNEEKNQDFVMSFMLQVSETKPNNLEPPIFCHKRRAELDLFSKIKRPRIEENNEDTSLVHEQCSSRKKDLSRNSSFNTLDLNMKADEDDDDKTGESSPISSDLTLETAADPLNPNGFLDSIQNKFELNTSPAREREKSEMFLTKIKGCFEDACGKQNLVNFSVDERVIEEICNRCGYFTNSQFDKWLKEIFQRSLLERVKYGGGEEKGILFRLCWSGNGKGDNRKLDRNEGFMGSSLPKCVQVNYLMR* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1886 1029 MobiDBLite consensus disorder prediction 863 877 - -
Ahy1g1886 1029 Gene3D - 13 185 IPR036628 -
Ahy1g1886 1029 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 11 1000 - -
Ahy1g1886 1029 PANTHER PROTEIN SMAX1-LIKE 5 11 1000 - -
Ahy1g1886 1029 SUPERFAMILY Double Clp-N motif 16 118 IPR036628 -
Ahy1g1886 1029 Gene3D - 617 819 IPR027417 -
Ahy1g1886 1029 Gene3D - 243 433 IPR027417 -
Ahy1g1886 1029 MobiDBLite consensus disorder prediction 861 887 - -
Ahy1g1886 1029 ProSiteProfiles Clp repeat (R) domain profile. 12 184 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1886 Ahy-Chr1 95450203 95454283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1886 - - ahf:112723607 1875.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3085 11 148503105 148507752 Ahy1g1886 1 95450203 95454283 hybridization
Ahy1g1886 1 95450203 95454283 Ahy13g2139 13 40259422 40263880 PCT
Ahy1g1886 1 95450203 95454283 Ahy3g1842 3 38192872 38197267 PCT
Ahy13g2139 13 40259422 40263880 Ahy1g1886 1 95450203 95454283 PCT
Ahy3g1842 3 38192872 38197267 Ahy1g1886 1 95450203 95454283 PCT