Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3085 ATGCGCTCATCAGGACTACCAAACTGCGGCGGTTTGCAGCAGACTCTTACGGCGGAGGCTGCTTCTGTTCTCAAACACTCTCTTGTCTTGGCTCGCCGGAGAGGCCATGCTCAGCTCACTCCTCTCCACGTGGCACCCACTCTCCTCTCCCTCTCTCCCTCCTTCAAACGAGCCTGCCTCACTTCTCACCCTTCATCTTCTTCCTCTCAACACCTTCTCCATTACAGAGCCCTCGAGCTTTGCTTCAATGTCGCCCTCAACAGGCTCCCCACCACTCCCTCTCCATTTCTTCACTCTTCTCTTCAGCCTTCTCTCTCCAACGCCCTCGTTGCCGCTCTCAAGCGAGCTCAGGCTCACCAGCGCAGAGGCTGCGTCGAGCACCACCAGCACCACCACCAGCACCACCACCAGAACCAGAACCAACCTCTTCTGGCCGTTAAGATCGAGCTTGAACACCTTACCATATCCATCCTCGATGATCCTAGCGTCAGCCGCGTCATGAGAGAAGCTGGCTTCTCCAGCACCGCCATTAAGAACAACTTGGAAGACTTGTCTAATAACTCTTCTCCACCTTCTTCTGTTTTCCATTCTTACAACGCTTCCGCTCGCGGTGGTGGTGTTTTTTCTTCTCCTTGCTCCCCTTCTGCTTCTGATAACACCACCAACCACCACCTTATCTTTTCTTCTCCGCCTAAGAAACCACCGTCCTTGCTGTATCCCTTCATCACCACCACCGCTACTGCACCATCATCTTCTTCTAAGGAGGATGATGTCAAAGCGGTTATGGATATTCTTCTAAGGACTAATCATAACAATAATAATAATAATAAGAAGAAGAAGAAGAACGTTGTCATAGTTGGTGACTCCGTTTCGTTGACGGAATCTCTTGTCGGAGAGATCATTGGAAGGTTTCAGAGGTCAGAGGTGCCTCATGAGTTGAAGACAACACAGTTCATCAGATTCCAACAATTCAGATCATTGAAGCACATGAAGAGAAGCGAAGTTGAGATGAAACTCATGGAACTCAAGAGGAAGGTGGATGATTCTTATAATGGCCATGGCATCATTATCTACATTGGAGACCTGAAGTGGACAGTGGAGGAAGAAAAAGAAGAAGAAGAAGGGGACGACGGAGTTTGTGGCGGCGGCGGTTGTTATAGCACAGTAGTGGATCATGTTGTTTCGGAAATAGGCAAGTTGTTCTCTTCTGCAACAACTGAATGTGGGGAAACAACAAAAAAAGTGTGGCTAATTGCAACAGCAACATATCAGACATACATCAGGTGTCAAATGAGACAACCCCCTCTTGAGATTCAATGGTCTCTTCAGCCTCTTCTTCTTCCTTCAGCTGGACTTGCCTTGACTCTCCATTCTTCCAGTAGTGTAATGGAAACAAAGCTCAATTGCTGTGAAGAATGTGCCTCAAATTATGAAAAGGAATCTCAATTTCTCAGACCAGGTCACAACAAAACGTTACCTTTATGGCTTCAGCCTCATACCACCGAAACAAATCATCAGAAGGATGAATTAACCGAGTTGAAAAGAAAATGGAATAGGCTATGCCAGTGTCTTCACCAAACCAAACAAGAAGCTCAGGATTATTGGAGCAACAACAATAGTTGGAATGCAAAGTCCTACACTTTTAACAATAATTCATCAAGTTCTGTGTCTTTTACAGATAAACCAACACCAACACATGGTTCCAATCTTGTATCTAGATTCAGGCGTCAAAATTCATGCACCATTGAGTTCAATTTCAGCGATAAAAGGCAAGCAACAACAGAACCAGTCTTAGGTTCCATGGAGTTATTGGAAGGTAAAGAAGTAATAAAGACTACTCTTGCTCTTGGGAATGGTGGTTCTAGTTCAGGTAGTGAAACGGTGGTGGTGGAAAATATAACCGATAGAACACTGCGAAGAGCTCATTTTTGTAAACTGTTGCAGGAGAATTTGCCATGGCACTCTGAGACTGTTCCTTCCATAGCAGAGGCCTTGCTTCATTCCAAACCCGCAAAACAAGGTAACATCACTTTGTTGTTCTTGCAAGGAAATGACAAAGTTGGCAAAACAAGGTTGGCACTTGCTGTTAAAGAATCACTTTTTGGCTCAGAAGATAACAAGTTTCTTCACATGGACATGCTGAAGAGGAAAGAGGCTTCCTTGGCTTCACATTCTGAGATGCTGGTTCAAGCATTGAAATCCCATCATCAAAAACTTGTGGTGCTGATTGAAAATGTTGATTTTGCTGATGCCCAGTTCAGGAAATGCATCTCTGATGGATTTGAAACGGGAAAGTTTGGAAATTTAAGAATAGCTGAAGAGAATTCATCAAGCCAAGTAGTGTTCATACTGACAAGTGGTGGATTCACAAGCAATAATGAAGAGAAAAATCAGGACTTTGTGATGAGTTTTATGTTGCAGGTCAGTGAAACCAAGCCTAATAACTTGGAGCCACCAATTTTTGGCCACAAGCGCAGGGCTGAGCTGGATTTGTTTTCCAAGATCAAGAGCCCAAGAATTGAAGAGAATAATGAAGATACATCCTTGGTTCATGAACAATGTAGTAGCAGAAAAAAGGACTTATCAAGAAACTCAAGCTTTAACACCCTTGATCTCAACATGAAAGCTGATGAAGATGATGATGACAAAACAGGAGAGAGTAGCCCAATTTCAAGTGATTTGACTCTTGAAACTGCGGCTGATCCACTGAACCCAAATGGATTTCTTGATTCCATTCAGAACAAGTTTGAACTCAACACAAGTCCAGCTAGGGAGAGGGAAAAGTCAGAGATGTTCTTAACTAAGATCAAAGGGTGTTTTGAGGATGCTTGTGGGAAGCAGAATCTGATGAATTTTAGTATAGATGAGAGGGTAATTGAGGAAATTTGTAATAGGTGTGGTTATTTTACTAACAGCCAATTTGAGAAATGGCTGAAAGAAATTTTTCAAAGAAGCTTATTAGAAAGAGTTAAGTATGGAGGGGGGGAAGAGAAGGGTATACTTTTTAGACTTTGTTGGAGTGGTAATGGTAAAGGAGATAATAGAAAATTGGATAGGAATGAGGGGTTTATGGGTTCATCTCTGCCAAAGTGTGTTCAAGTTAATTACTTGATGAGGTGA 3120 0.434 MRSSGLPNCGGLQQTLTAEAASVLKHSLVLARRRGHAQLTPLHVAPTLLSLSPSFKRACLTSHPSSSSSQHLLHYRALELCFNVALNRLPTTPSPFLHSSLQPSLSNALVAALKRAQAHQRRGCVEHHQHHHQHHHQNQNQPLLAVKIELEHLTISILDDPSVSRVMREAGFSSTAIKNNLEDLSNNSSPPSSVFHSYNASARGGGVFSSPCSPSASDNTTNHHLIFSSPPKKPPSLLYPFITTTATAPSSSSKEDDVKAVMDILLRTNHNNNNNNKKKKKNVVIVGDSVSLTESLVGEIIGRFQRSEVPHELKTTQFIRFQQFRSLKHMKRSEVEMKLMELKRKVDDSYNGHGIIIYIGDLKWTVEEEKEEEEGDDGVCGGGGCYSTVVDHVVSEIGKLFSSATTECGETTKKVWLIATATYQTYIRCQMRQPPLEIQWSLQPLLLPSAGLALTLHSSSSVMETKLNCCEECASNYEKESQFLRPGHNKTLPLWLQPHTTETNHQKDELTELKRKWNRLCQCLHQTKQEAQDYWSNNNSWNAKSYTFNNNSSSSVSFTDKPTPTHGSNLVSRFRRQNSCTIEFNFSDKRQATTEPVLGSMELLEGKEVIKTTLALGNGGSSSGSETVVVENITDRTLRRAHFCKLLQENLPWHSETVPSIAEALLHSKPAKQGNITLLFLQGNDKVGKTRLALAVKESLFGSEDNKFLHMDMLKRKEASLASHSEMLVQALKSHHQKLVVLIENVDFADAQFRKCISDGFETGKFGNLRIAEENSSSQVVFILTSGGFTSNNEEKNQDFVMSFMLQVSETKPNNLEPPIFGHKRRAELDLFSKIKSPRIEENNEDTSLVHEQCSSRKKDLSRNSSFNTLDLNMKADEDDDDKTGESSPISSDLTLETAADPLNPNGFLDSIQNKFELNTSPAREREKSEMFLTKIKGCFEDACGKQNLMNFSIDERVIEEICNRCGYFTNSQFEKWLKEIFQRSLLERVKYGGGEEKGILFRLCWSGNGKGDNRKLDRNEGFMGSSLPKCVQVNYLMR* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3085 1039 Gene3D - 13 188 IPR036628 -
Ahy11g3085 1039 MobiDBLite consensus disorder prediction 842 859 - -
Ahy11g3085 1039 Gene3D - 625 828 IPR027417 -
Ahy11g3085 1039 MobiDBLite consensus disorder prediction 873 887 - -
Ahy11g3085 1039 PANTHER PROTEIN SMAX1-LIKE 5 11 1010 - -
Ahy11g3085 1039 SUPERFAMILY Double Clp-N motif 16 119 IPR036628 -
Ahy11g3085 1039 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 11 1010 - -
Ahy11g3085 1039 MobiDBLite consensus disorder prediction 842 897 - -
Ahy11g3085 1039 ProSiteProfiles Clp repeat (R) domain profile. 12 187 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3085 Ahy-Chr11 148503105 148507752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3085 - - ahf:112723607 1973.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3085 11 148503105 148507752 Ahy11g3085 11 148503105 148507752 ECH
Ahy11g3085 11 148503105 148507752 Ahy1g1886 1 95450203 95454283 hybridization
Ahy11g3085 11 148503105 148507752 Ahy13g2139 13 40259422 40263880 PCT
Ahy11g3085 11 148503105 148507752 Ahy3g1842 3 38192872 38197267 PCT
Ahy13g2139 13 40259422 40263880 Ahy11g3085 11 148503105 148507752 PCT
Ahy3g1842 3 38192872 38197267 Ahy11g3085 11 148503105 148507752 PCT