Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1846 ATGGCAGAACCAACAGCTTCAGTGACGCTTCTCATAGCCAGCTGGTTAACACCTTCTTCCCTCTTCATCTTTGTCAACCTCGTCATTGGCACCATTGCCATCACCTCCCGCTTCACCTCCTCCCCCAACAACCGAATTCAAGAACATGAACTCCAACACCCTTTCACTCGCTCACCCTCCCTCCTGCAACGAGTCAGATCCTTCAGACTCACTCATCAATACACCTACGACACAACGCCGAGTACTGCCGAACCCGGCGAGTTCACTCAGCCTCAACTCGTTCGAACATCCTCGCTTTTGGAACGAGTCAGGTCCTTCAATTTCAGCCTCCACAAACACGAAACCACGGAAACATCACATGCAGAAAAAACAGATCATAACCAGTCCCAGGCCCAGGCCCAGGCCCAAACCAACCAACCGGAATCCGAAGAGCCGGAGAAACCGAAAGAAGTACCGCAGCTGAGACGAACTCCGTCGCTGTTGCAGCGCCTTCAGTCTATGAACTTCTCGCGCCTCTACAGAGGAGAAGAAGAACCCGAACCAGCCGAGGCAAGTGGTTCGGGTTCGGATCCGAGTCGGAAGGATGCTGAGATGAGGAAATCAGCGAGCGAGAGGGGGCATAGCGAGCGGGTGGAGGATGAGGAGTCGGTGGAGAGGCGGAGGCCGGCGACGACGAGGGAGTCGACGGGTGAAGACGAGGAGGTGGACGCGAAAGCGGACGATTTCATAAACAGGTTCAAGAAGCAGCTGAGGCTGCAGAGGGTTGATTCCATTCTCCGTTACAGAGAGATGCTCAGAGGAAACTGA 807 0.5465 MAEPTASVTLLIASWLTPSSLFIFVNLVIGTIAITSRFTSSPNNRIQEHELQHPFTRSPSLLQRVRSFRLTHQYTYDTTPSTAEPGEFTQPQLVRTSSLLERVRSFNFSLHKHETTETSHAEKTDHNQSQAQAQAQTNQPESEEPEKPKEVPQLRRTPSLLQRLQSMNFSRLYRGEEEPEPAEASGSGSDPSRKDAEMRKSASERGHSERVEDEESVERRRPATTRESTGEDEEVDAKADDFINRFKKQLRLQRVDSILRYREMLRGN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1846 268 PANTHER COTTON FIBER (DUF761) 89 267 - -
Ahy1g1846 268 PANTHER DUF4408 DOMAIN PROTEIN 6 76 - -
Ahy1g1846 268 Pfam Domain of unknown function (DUF4408) 12 38 IPR025520 -
Ahy1g1846 268 PANTHER COTTON FIBER (DUF761) 6 76 - -
Ahy1g1846 268 MobiDBLite consensus disorder prediction 114 242 - -
Ahy1g1846 268 Pfam Cotton fibre expressed protein 232 266 IPR008480 -
Ahy1g1846 268 PANTHER DUF4408 DOMAIN PROTEIN 89 267 - -
Ahy1g1846 268 MobiDBLite consensus disorder prediction 190 242 - -
Ahy1g1846 268 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1846 Ahy-Chr1 95068450 95069639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1846 - - aip:110263604 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3114 11 148777024 148777836 Ahy1g1846 1 95068450 95069639 hybridization
Ahy1g1846 1 95068450 95069639 Ahy13g2187 13 42854489 42855605 PCT
Ahy1g1846 1 95068450 95069639 Ahy3g1878 3 41027237 41028395 PCT
Ahy13g2187 13 42854489 42855605 Ahy1g1846 1 95068450 95069639 PCT
Ahy3g1878 3 41027237 41028395 Ahy1g1846 1 95068450 95069639 PCT