Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3114 ATGGCAGAACCAACAGCTTCAATGACGCTTCTCATAGCCAGCTGGTTAACACCTTCTTCCCTCTTCATCTTTGTCAACCTCGTAATTGGCACCATTGCCATCACCTCCCGCTTCACCTCCTCCCACAACAACCGAATTCAAGAACATGAACTCCAACACCCTTTCACTCGCTCACCCTCCCTCCTGCAACGAGTCAGATCCTTCAGACTCACTCATCAATACACCTACGACACAACGCCGAGTACTGCCGAATCCGGTGAGTTCACTCAGCCTCAACTCGTTCGAACATCCTCGCTTTTGGAACGAGTCAGGTCCTTCAATTTCAGCCTCCACAAACACGAAACCACGGAAACATCACATGCAGAAAAAACAGATCATAACCAGTCCCAGGCCCAGGCCCAGGCCCAAACCAACCAACCGGAATCCGAAGAGCCGGAGAAACCGAAAGAAGTACCGCAGCTGAGTCGAACTCCGTCGCTGTTGCAGCGCCTTCAGTCTATGAACTTGTCGCGCCTCTACAAAGGAGAAGAAGAACCCGAACCAACCGAGGCAAGTGGTTCGGGTTCGGGTTCGGATCCGAGTCGGAAGGATGCTGAGATGAGGAAATCAGCGAGCGAGAGGGTGCATAGCGGGCGGGAGGAGGATGAGGAGTCGGTGGAGAGGCGGAGGCCGGCGACGACGAGGGAGTCGACGGGTGAAGACGAGGAGGTGGATGCGAAAGCGGACGATTTCATAAACAGGTTCAAGAAGCAGCTGAGGCTGCAGAGGGTTGATTCCATTCTCCGTTACAGAGAGATGCTCAGAGGAAACTGA 813 0.5375 MAEPTASMTLLIASWLTPSSLFIFVNLVIGTIAITSRFTSSHNNRIQEHELQHPFTRSPSLLQRVRSFRLTHQYTYDTTPSTAESGEFTQPQLVRTSSLLERVRSFNFSLHKHETTETSHAEKTDHNQSQAQAQAQTNQPESEEPEKPKEVPQLSRTPSLLQRLQSMNLSRLYKGEEEPEPTEASGSGSGSDPSRKDAEMRKSASERVHSGREEDEESVERRRPATTRESTGEDEEVDAKADDFINRFKKQLRLQRVDSILRYREMLRGN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3114 270 MobiDBLite consensus disorder prediction 194 244 - -
Ahy11g3114 270 MobiDBLite consensus disorder prediction 155 169 - -
Ahy11g3114 270 PANTHER COTTON FIBER (DUF761) 6 75 - -
Ahy11g3114 270 PANTHER COTTON FIBER (DUF761) 90 269 - -
Ahy11g3114 270 Pfam Domain of unknown function (DUF4408) 12 38 IPR025520 -
Ahy11g3114 270 PANTHER DUF4408 DOMAIN PROTEIN 6 75 - -
Ahy11g3114 270 PANTHER DUF4408 DOMAIN PROTEIN 90 269 - -
Ahy11g3114 270 MobiDBLite consensus disorder prediction 114 244 - -
Ahy11g3114 270 MobiDBLite consensus disorder prediction 125 141 - -
Ahy11g3114 270 Pfam Cotton fibre expressed protein 234 268 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3114 Ahy-Chr11 148777024 148777836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3114 - - aip:110263604 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3114 11 148777024 148777836 Ahy11g3114 11 148777024 148777836 ECH
Ahy11g3114 11 148777024 148777836 Ahy1g1846 1 95068450 95069639 hybridization
Ahy11g3114 11 148777024 148777836 Ahy13g2187 13 42854489 42855605 PCT
Ahy11g3114 11 148777024 148777836 Ahy3g1878 3 41027237 41028395 PCT
Ahy13g2187 13 42854489 42855605 Ahy11g3114 11 148777024 148777836 PCT
Ahy3g1878 3 41027237 41028395 Ahy11g3114 11 148777024 148777836 PCT