Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1843 ATGGCAAGGTTTTCGATGCTTGAAAATGTTTCATTGATTCTGCTCATAAATCTAATTATAATAACTACGACTACTACCACAGTGCTCACAAATGAAATAATAACCACATATCAATCATGTTCAGCATTTCATCCATCCATGGAGATTTCAAATGACCTAGATTATGACAATTCTACCCTTACACTCGCCTCAACCGATTACGGCCTTAAAATTCACGAGAAGCCTCTGGCTGTCCTTCAACCAAAGTCAATAACTGAAATATCAGAACTAATAAAAGTGTCAAACTCCCTTTCTACCCCTTTCACAATAGCAGCACGTGGGCAAGCACACTCGGTGTACGGACAAGCGATGGCGCGTGAGGGGATAGTGGTGAACATGACGCATCTAAACGGTTACAGACACGGGAAGGGGGTTGTTATATTTCGCGATGAGAAGGATCCATGGAATTCTTATGCTGACGTGGGCGGTGAACAGGTGTGGGATGACGTGTTAAATGCAGCACTTGAATATGGACTCACACCACTCTCGTTTACTGATAGTTTGGGCACTTCTGTTGGCGGAACCCTCGTCAATGCCGGAATCGGTGCCCAAGTATTCAAGTTTGGTCCTCAGATCGCTAATGTTTATGAACTCGATGTCATTACAGGAAAAGGAGATCTTAAGACTTGTTCTGCAGAAAAGAACTCAGAGTTATTTTATGGTGTTCTTGGAGGTTTAGGTCAATTTGGAATAATAACGAGAGCAAGAATAGCCTTAGGACCTGCGTATACAAAGGTGAAGTGGCTTCGTTTGCTTTACAGTGATTTCTCCACATATTCTAAAGACCAAGAATACTTAATTTCATTGAATGGAAGAAATGATAACGCATTCGATGCAGTAGAAGGTTTTCTTATGATAAATCAGTGGCCGAATATCATTGACTTTTTTCCAACACAAGATCTGCCTCGCATAAATTCCTTATTAGCCCAACATAACATCCTCTATGTCTTGGAGCTTGCCAAATATTACGACAACAGTACTGAAGAGCAAATTGACCAGGATGTTGAACGTTTGGTGATGGGGTTAAAGTATGTTCCTACATTTAAATATGAAAAAGATGTGTTGTACCAGAATTTTCTACATAGATATGAGAGTGCAGCAGCAGGACAAGGACTTCCAGAAGGACCTAAATCTTGGTTGGACACTTTTGTTCCAGGATCTAGAATCTCAGATATAAATGAAGGTGTTTTCAAGAACATTGTCTTTAAACAAAACCTTACTGCCAACGGAATCATACTAATCTTCCCCATGAACCGAACAAAGTGGAATGATAAAATGTCAGTGGCTATACCTGATGAAGAAGTGTTTTATCTCGTGAGTGTTCTGCAAGCAGTTACATATGATACGTTGAAGATGTTTGATGATCAAAAGAATCAAATATTAGAGTTCTATAAAAATTCAGGCATTAAAATCAAGCAATATCTTCCACGAAACAAAACTCACGAAGAATGGATCGAGCATTTTGGTTCCAAGTGGCAAAAGTTCGAGGACTCGAAGAATAAATTTGATCCCAAAAGAATATTGGCTCCTGGACAAGGGATTTTTCAATTGAACAATAAGATATGTATGTTTTAA 1614 0.3922 MARFSMLENVSLILLINLIIITTTTTTVLTNEIITTYQSCSAFHPSMEISNDLDYDNSTLTLASTDYGLKIHEKPLAVLQPKSITEISELIKVSNSLSTPFTIAARGQAHSVYGQAMAREGIVVNMTHLNGYRHGKGVVIFRDEKDPWNSYADVGGEQVWDDVLNAALEYGLTPLSFTDSLGTSVGGTLVNAGIGAQVFKFGPQIANVYELDVITGKGDLKTCSAEKNSELFYGVLGGLGQFGIITRARIALGPAYTKVKWLRLLYSDFSTYSKDQEYLISLNGRNDNAFDAVEGFLMINQWPNIIDFFPTQDLPRINSLLAQHNILYVLELAKYYDNSTEEQIDQDVERLVMGLKYVPTFKYEKDVLYQNFLHRYESAAAGQGLPEGPKSWLDTFVPGSRISDINEGVFKNIVFKQNLTANGIILIFPMNRTKWNDKMSVAIPDEEVFYLVSVLQAVTYDTLKMFDDQKNQILEFYKNSGIKIKQYLPRNKTHEEWIEHFGSKWQKFEDSKNKFDPKRILAPGQGIFQLNNKICMF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1843 537 SUPERFAMILY FAD-binding/transporter-associated domain-like 53 254 IPR036318 GO:0050660
Ahy1g1843 537 Gene3D - 258 487 IPR016170 -
Ahy1g1843 537 Gene3D - 126 257 IPR016169 -
Ahy1g1843 537 Pfam FAD binding domain 75 224 IPR006094 GO:0050660
Ahy1g1843 537 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 257 528 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ahy1g1843 537 Gene3D - 56 528 IPR016167 -
Ahy1g1843 537 PANTHER GULONOLACTONE OXIDASE 25 529 - -
Ahy1g1843 537 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 25 529 - -
Ahy1g1843 537 SUPERFAMILY FAD-linked oxidases, C-terminal domain 256 528 IPR016164 GO:0003824|GO:0050660
Ahy1g1843 537 ProSiteProfiles PCMH-type FAD-binding domain profile. 71 255 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1843 Ahy-Chr1 94939024 94944222 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1843 K00279 - gmx:100816815 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3117 11 148817802 148822223 Ahy1g1843 1 94939024 94944222 hybridization
Ahy1g1843 1 94939024 94944222 Ahy13g2190 13 43009084 43014008 PCT
Ahy1g1843 1 94939024 94944222 Ahy3g1880 3 41283507 41288285 PCT
Ahy13g2190 13 43009084 43014008 Ahy1g1843 1 94939024 94944222 PCT
Ahy3g1880 3 41283507 41288285 Ahy1g1843 1 94939024 94944222 PCT