Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2190 ATGGTTGAAAACTACCTTCCTGCTCCCACATACTTCATCCTTCTCCTAATAACCATAACACGCTTGATATCCACCGTTGGCAACAAAACTGAGCATTTGAACAACAACTCCCTCCTCTCATCGGACCTCATCTCCCGCCACAACCTCCACGACGACCCCGAGTCTCTAGAATCGGCTTCTAGAGACTTCGGCAACCTAGTCCATCATCTCCCGCGGGCAGTGTTCCACCCGCGGTCTCCACAAGACATAGCCTCCCTCGTGAAGACTTCGTACGAGAGCCCTGCCCCTTTCACGATATCCGTGAAGGGACAGGGCCACTCCACGAGGGGTCAGGCTATGGCCAGGGGAGGGGTGGTGGTGGACATGAGGGCCCTCAGAGAAGAAAATAATAGTAATAAGAAGAAGAACATTCGCGTGATTTGGAGAGAGGAAGGATACTATGGTGACGTGGGAGGGGAGGCGCTGTGGGCGGATGTGCTGCGGGAGGCGGCGGAGATGGGAGTTGCACCGGCTTCTTGGACCGATTACTTGTACTTGACTGTGGGAGGGACTCTCTCCAATGGCGGCATCAGTGGCCAGAGCTTCAAGTATGGACCCCAAATCAGCATTGTTCATGAAATGGATGTTATCACTGGAAAAGGAGAACTAGTAACATGCTCTTCACACACAAATTCTGAGTTATTTCATGCGGTGCTTGGAGGCTTAGGACAATTTGGCATTATAACAAGGGCAAGAATTGCTCTTCACCCAGCACCAAAAATGGTGAAATGGGTCAGGCTTCTATACAATGACTTTTCTGCTTTTACCAAAGACCAAGAGCGATTAATCTCAATCAATGGAAGGAAACACAATAATAATGATAATAATGATGATGATGTTGCATTGGATTATGTGGAAGGGATGCTACTAATGCACCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATCCAAGAATCATTTCCCTAGTAACTCAACATAGCATCCTTTATTGTCTTGAATTGGCCAAATATTATGATGAAAAATCTGAAAACAATGTGGACAAGGAAATGCAAGGTTTGCTTGAAGGACTTAGCTATATGCCGGGATTTTATTATGAGAAAAAAGTGTCATATGTTGAGTTCTTGAATAGAGTCAGAAGTGGAGAGTTGAAGCTTCAGTCACAAAGACAATGGGATGTTCCTCATCCATGGCTTAATTTGTTTATACCCAAATCTCAAATCATGGATTTTGATTCCGGCGTATTCAAGAATATCATTTTCAAACGAAACATCACCACAGGACCTGTCTTGATTTACCCCATGAATAGAAGCAAGTGGGACAAAAGAATGTCAGCATCTATACCAGAAGAGGAGGATATCTTTTATACAGTTGGATTTTTGCACTCAAGTGGATTTGATAATTGGAAGGCATTTGATGCTCAAAACAAAGAAATCTTGAAATTTTGTAATGATGCTGGAATTAAGGTTAAGCAATATCTTCCCCACTACAGCACACAAGAAGATTGGACAAAACACTTTGGCCCTAATAAATGGAGGACTTTCTTGGAAAGAAAACTCCAATTTGATCCAAGAATGATTCTATCACCTGGGCAGAGAATCTTCAACAAAGATTAA 1632 0.4363 MVENYLPAPTYFILLLITITRLISTVGNKTEHLNNNSLLSSDLISRHNLHDDPESLESASRDFGNLVHHLPRAVFHPRSPQDIASLVKTSYESPAPFTISVKGQGHSTRGQAMARGGVVVDMRALREENNSNKKKNIRVIWREEGYYGDVGGEALWADVLREAAEMGVAPASWTDYLYLTVGGTLSNGGISGQSFKYGPQISIVHEMDVITGKGELVTCSSHTNSELFHAVLGGLGQFGIITRARIALHPAPKMVKWVRLLYNDFSAFTKDQERLISINGRKHNNNDNNDDDVALDYVEGMLLMHQGPINNWRSSFFPLADHPRIISLVTQHSILYCLELAKYYDEKSENNVDKEMQGLLEGLSYMPGFYYEKKVSYVEFLNRVRSGELKLQSQRQWDVPHPWLNLFIPKSQIMDFDSGVFKNIIFKRNITTGPVLIYPMNRSKWDKRMSASIPEEEDIFYTVGFLHSSGFDNWKAFDAQNKEILKFCNDAGIKVKQYLPHYSTQEDWTKHFGPNKWRTFLERKLQFDPRMILSPGQRIFNKD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2190 543 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 252 540 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ahy13g2190 543 Gene3D - 52 540 IPR016167 -
Ahy13g2190 543 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 71 106 IPR006093 GO:0016491
Ahy13g2190 543 Gene3D - 254 498 IPR016170 -
Ahy13g2190 543 PANTHER GULONOLACTONE OXIDASE 19 541 - -
Ahy13g2190 543 ProSiteProfiles PCMH-type FAD-binding domain profile. 67 251 IPR016166 GO:0071949
Ahy13g2190 543 Pfam FAD binding domain 71 220 IPR006094 GO:0050660
Ahy13g2190 543 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 251 IPR036318 GO:0050660
Ahy13g2190 543 Gene3D - 122 253 IPR016169 -
Ahy13g2190 543 PANTHER CYTOKININ DEHYDROGENASE 3 19 541 - -
Ahy13g2190 543 SUPERFAMILY FAD-linked oxidases, C-terminal domain 252 541 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2190 Ahy-Chr13 43009084 43014008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2190 K00279 - gmx:100804431 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2190 13 43009084 43014008 Ahy3g1880 3 41283507 41288285 hybridization
Ahy11g3117 11 148817802 148822223 Ahy13g2190 13 43009084 43014008 PCT
Ahy1g1843 1 94939024 94944222 Ahy13g2190 13 43009084 43014008 PCT
Ahy13g2190 13 43009084 43014008 Ahy11g3117 11 148817802 148822223 PCT
Ahy13g2190 13 43009084 43014008 Ahy1g1843 1 94939024 94944222 PCT