Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3117 ATGGAGATTTCAAATGACCTAGATTATGACAATTCTACCCTTACACTCGCCTCAACCGATTACGGCCTTAAAATTCACGAGAAGCCTCTGGCAGTTCTGCAACCAACGTCAATAACTGAAATATCAGAACTAATAAAAGTGTCAAATTCCCTTTGTACCCCTTTCACAATAGCAGCACGTGGGCAAGCACACTCGGTGTACGGACAAGCGATGGCGCGTGAGGGGATAGTGGTGAACATGACGCATCTAAACGGTTACAGGCACGGGAAGGGGGTTGTTATATTTCGCGATGAGAAGGATCCGTGGAATTCTTATGCTGACGTGGGCGGTGAACAGGTGTGGGATGACGTGTTAAATGCAGCACTTGAATATGGACTCACACCACTCTCATTTACTGATAGTTTGGGCACTTCTGTTGGCGGAACCCTCGTCAATGCCGGAATCGGTGCCCAAGTATTCAAGTTTGGTCCTCAGATCGCTAATGTTTATGAACTCGATGTTATTACAGGAAAAGGAGATCTTAAGACTTGTTCTGCAGAAAAGAACTCAAAGTTATTTTATGGTGTTCTTGGAGGTTTAGGTCAATTTGGAATAATAACGAGAGCAAGAATAGCCTTAGGACCTGCGTATACAAAGGTGAAGTGGCTTCGTTTGCTTTACAGTGATTTCTCTGCATATTCTAAAGACCAAGAATACTTAATTTCATTGAATGGAAGAAATGATAATGCATTCGATGCAGTAGAAGGTTTTCTTATGATAAACCAGTGGCCGAATATCATTGACTTTTTTCCAACACAAGACCTGCCTCGCATAAATTCCTTATTAGCCCAACATAACATCCTCTATGTCTTGGAGCTTGCCAAATATTACGACGACAGTACTCAAGACCAAATTGACCAGGATGTTGAACGTTTGGTGATGGGGTTAAAGTATGTTCCTACATTTAAATATGAAAAAGATCTGTTGTACCAGAATTTTCTACATAGATCTGAGAGTGCAGCAGCAGGACAAGGACTTCCTGGAGGACCTAAATCTTGGTTGGACACTTTTGTTCCAGGATCTAGAATCTCAGATGTAAATGAAGGTGTTTTCAAGAACATTATCTTTAAACAAAACCTTTCTGCCAACGGAATCATACTAATCTTCCCCATGAACCGAACAAAGTGGAATGATAAAATGTCAGTGGCTATACCTGATGAAGAAGTGTTTTATCTCGTGAGTGTTCTACAAGCAGTTACATATGATACGTTGAAGATATTTGATGATCAGAAGAATCAAATATTAAAATTCTATAAAGATTCAGGCATTGGAATCAAGCAATATCTTCCACGAAACAAAACTCACGAAGAATGGATCGAGCATTTTGGTTCCAAGTGGCAAAAGTTCGAGGAAGCAAAGAATAAATTTGATCCCAAAAGAATATTGGCTCCTGGACAGGGAATTTTTCAATTGAACAATAAAATATGTATGCTTTAA 1476 0.3991 MEISNDLDYDNSTLTLASTDYGLKIHEKPLAVLQPTSITEISELIKVSNSLCTPFTIAARGQAHSVYGQAMAREGIVVNMTHLNGYRHGKGVVIFRDEKDPWNSYADVGGEQVWDDVLNAALEYGLTPLSFTDSLGTSVGGTLVNAGIGAQVFKFGPQIANVYELDVITGKGDLKTCSAEKNSKLFYGVLGGLGQFGIITRARIALGPAYTKVKWLRLLYSDFSAYSKDQEYLISLNGRNDNAFDAVEGFLMINQWPNIIDFFPTQDLPRINSLLAQHNILYVLELAKYYDDSTQDQIDQDVERLVMGLKYVPTFKYEKDLLYQNFLHRSESAAAGQGLPGGPKSWLDTFVPGSRISDVNEGVFKNIIFKQNLSANGIILIFPMNRTKWNDKMSVAIPDEEVFYLVSVLQAVTYDTLKIFDDQKNQILKFYKDSGIGIKQYLPRNKTHEEWIEHFGSKWQKFEEAKNKFDPKRILAPGQGIFQLNNKICML* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3117 491 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 2 483 - -
Ahy11g3117 491 ProSiteProfiles PCMH-type FAD-binding domain profile. 25 209 IPR016166 GO:0071949
Ahy11g3117 491 PANTHER GULONOLACTONE OXIDASE 2 483 - -
Ahy11g3117 491 Gene3D - 80 211 IPR016169 -
Ahy11g3117 491 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 211 482 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ahy11g3117 491 SUPERFAMILY FAD-linked oxidases, C-terminal domain 210 482 IPR016164 GO:0003824|GO:0050660
Ahy11g3117 491 Pfam FAD binding domain 29 178 IPR006094 GO:0050660
Ahy11g3117 491 Gene3D - 212 441 IPR016170 -
Ahy11g3117 491 Gene3D - 10 482 IPR016167 -
Ahy11g3117 491 SUPERFAMILY FAD-binding/transporter-associated domain-like 7 208 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3117 Ahy-Chr11 148817802 148822223 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3117 K00279 - gmx:100816815 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3117 11 148817802 148822223 Ahy1g1843 1 94939024 94944222 hybridization
Ahy11g3117 11 148817802 148822223 Ahy13g2190 13 43009084 43014008 PCT
Ahy11g3117 11 148817802 148822223 Ahy3g1880 3 41283507 41288285 PCT
Ahy13g2190 13 43009084 43014008 Ahy11g3117 11 148817802 148822223 PCT
Ahy3g1880 3 41283507 41288285 Ahy11g3117 11 148817802 148822223 PCT