Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3581 ATGGGCACGGACGCGCAAGTCGCGCAACCCACCCCCCAACCTCCATCTTCTTCTCCTCGCCCCATCTGTGATCGCAGCAGCAGCACCGCCTCCGCCGCCACGCCATCTTCACCGCCGGCGACTCGCCCTCCCTCATCATCACCTTCTCTTCCCCCTCTCACCACCACCCATTCTCTCTCTCTCTCACTCCTCTCTTCCTCCTCCCGGCCGAAATCCCACCGCGCCACCGCCTCCGCCTCCGCGCCACCATCACCGCCTTCCTCTCTCTCTTTTCCCTTCTCTCTTACTCCTCTGGCCGCCTCACCTTCTCACCATCGCCGTCCCTCCGCCCTTCCGCCTCTCGAACCACCGCGCCACCGCTCACGGCGGTGCCAATCTGTCTCTGCTGCCCTATCGTCGTTTCCCCCCTTTTCCGTTTTCCGTTTTTCCCGGCTCCCAGGTGTTACCTTTAATGAGGATTACGGTTTTGGTTCAGTCACTTATGCTTACTTGTTCACTTTTACATATTCAGTGCAACATCATGATTGCTCTTTGATAATGGACGAGGATAAAGAGAATCAGCAGTTGCCTTCTACCAATCCTGGCAAATTCCCCAATCTCTACTGTGAGCTTCGGTTCTCTAGGTATCGAACCACGAAGCTAAATATTGAGAAGAAGTTGCTCCTACCTAATGATGTGAGACGGCGCATTAATGGTCGGATCCTTGAGTTGGGTATTGACTTTGTTGACCGGGATTTGGGTGACATTAATATCTCTTGGGTGAAGGAATTCTACTACAACTTCTTCTGTCCGACCTTGGATTCATTTCAGCTGAGGGGTAGAGAGATTATGCTCACCGAGGCCGCCATTGGGGAGGCATTACATTGCCGATACATTCCGCATGACCAGTGTGCCCATCATCAGGCTGAGATAGCCATCCATACCATGACTTTTGATTATGAGGCGCTTCGGCGCGTGATTGGGATACCGGAGGCTTCTTGGGTTATGGATGCGGATGATGATGTGCGACCACCACCAGCTGACGCAGATGACAGGGAGATTACTATCCCCTGGGGTGTTTGGGTGCACGAGAAGCCACCTGCTAGCCGCCGCTCTCGGGCTCGGGCTGTCATAGGGACACCTTCACCACCAGCCCCTGCAGCTGGCCCATCATCTTCTACAGCCGCAGCTCCTCCACCTTCTACAGACCCTCCAGCAGCACCTGAGCCTACCTATCTCCTGGTCCAGCGTCTCTTCCGGTTCTTAGAGCGAGAGCGACACCATGTCAGACGCCGTTTGGATCGGATGGACCAGGTGATTGGTGTGATATCCGTGGTTGTGATACTGGGATCAGTAACAGAATGCAGAAGATTGAACGGCATTGAATATCCTGCAATCAACTGCAGAAAGCACAGTGCGGTATTGACTGATTTTGGTGGCGTTGGTGATGGAAAAACTTCCAACACAAAGGCATTTCAATATGCAATAAGCAACCTGAGCCACTATGCATCTGATGGTGGTGCACAGCTTCTTGTGCCACCCGGCAAGTGGCTCACTGGAAGCTTTAACCTCACAAGCCATTTCACTCTCTTTCTCCAAAAGGGTGCTCTCATTCTTGCATCTCAGGATGAATCAGAATGGCCTCCACTTTCTGTTCTACCATCTTATGGAAGGGGAAGAGATGCTCCTGATGGAAGATTTAGCAGCCTCATCTTTGGAACTAACCTCACTGATGTTGTGATCACCGGTGCTAATGGCACAATTGACGGGCAAGGGTCATATTGGTGGGCCAAGTTCAAACAGAACCAATTCAAACTGACTAGACCGTACTTGATAGAGATCATGTACTCTGATCAAATCCAGATTTCAAATCTCACTCTGCTCAATTCTCCATCCTGGTTTGTTCATCCGATATACAGCAGTAATATAATAATTCAACGGCTTACGATTGTTGCACCAATTGACTCTCCCAACACAGATGGAATAAACCCAGATTCATGCAGAAACACTAGGATTGAAGACTGCTACATTGTATCGGGAGATGACTGCATTGCAGTGAAGAGTGGGTGGGATGAATACGGAATCAAATTCGGGAAGCCAACGGAACACCTGATCATCAGGAGACTGACATGCATATCCCCCGACAGCGCCATGATTGCATTAGGCAGTGAAATGTCCGGTGGCATCCGAGATGTGAGGGCTGAAGACATCACGGCCATCAACACGCAATCGGCGGTTAGAATCAAGACAGCAATTGGCAGAGGAGGGTATGTTAAGGACATATTTGTCAAGGGAGCTCAATTGCACACCATGAAGTATGTCTTCTGGATCACCGGTTCATATGGGTCGCATCCTGATAATGGTTTTGATCCAAACGCGCTTCCTCAAATCACTGGGATAAACTACAGAGACTTCACTGCTGACAATGTCACATATTCAGCAAGACTAGAAGGCATCTCCAAGGACCCCTTTAGTGGAATATGCATTTCAAATGTCGATATTCGACTCAGTCAAGAGAAGAAGAAGCTTCAATGGAATTGCACGGATGTCTCTGGAGTTACAAAAAATGTCACTCCTCAGCCTTGTGATTTGCTTCCTCTCAAGACACAAGCCCATGACTGTCCTTATCCAACTGACAAACTCCCCATTGATAGACTTCAACTCCATACTTGTTCACTTTAA 2661 0.4987 MGTDAQVAQPTPQPPSSSPRPICDRSSSTASAATPSSPPATRPPSSSPSLPPLTTTHSLSLSLLSSSSRPKSHRATASASAPPSPPSSLSFPFSLTPLAASPSHHRRPSALPPLEPPRHRSRRCQSVSAALSSFPPFSVFRFSRLPGVTFNEDYGFGSVTYAYLFTFTYSVQHHDCSLIMDEDKENQQLPSTNPGKFPNLYCELRFSRYRTTKLNIEKKLLLPNDVRRRINGRILELGIDFVDRDLGDINISWVKEFYYNFFCPTLDSFQLRGREIMLTEAAIGEALHCRYIPHDQCAHHQAEIAIHTMTFDYEALRRVIGIPEASWVMDADDDVRPPPADADDREITIPWGVWVHEKPPASRRSRARAVIGTPSPPAPAAGPSSSTAAAPPPSTDPPAAPEPTYLLVQRLFRFLERERHHVRRRLDRMDQVIGVISVVVILGSVTECRRLNGIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGAQLLVPPGKWLTGSFNLTSHFTLFLQKGALILASQDESEWPPLSVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGANGTIDGQGSYWWAKFKQNQFKLTRPYLIEIMYSDQIQISNLTLLNSPSWFVHPIYSSNIIIQRLTIVAPIDSPNTDGINPDSCRNTRIEDCYIVSGDDCIAVKSGWDEYGIKFGKPTEHLIIRRLTCISPDSAMIALGSEMSGGIRDVRAEDITAINTQSAVRIKTAIGRGGYVKDIFVKGAQLHTMKYVFWITGSYGSHPDNGFDPNALPQITGINYRDFTADNVTYSARLEGISKDPFSGICISNVDIRLSQEKKKLQWNCTDVSGVTKNVTPQPCDLLPLKTQAHDCPYPTDKLPIDRLQLHTCSL* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3581 886 PANTHER PECTIN LYASE-RELATED 443 885 - -
Ahy19g3581 886 MobiDBLite consensus disorder prediction 20 36 - -
Ahy19g3581 886 MobiDBLite consensus disorder prediction 364 402 - -
Ahy19g3581 886 Pfam Glycosyl hydrolases family 28 563 844 IPR000743 GO:0004650|GO:0005975
Ahy19g3581 886 Gene3D - 449 853 IPR012334 -
Ahy19g3581 886 MobiDBLite consensus disorder prediction 1 123 - -
Ahy19g3581 886 PANTHER ENDO-POLYGALACTURONASE-LIKE PROTEIN 443 885 - -
Ahy19g3581 886 SUPERFAMILY Pectin lyase-like 461 882 IPR011050 -
Ahy19g3581 886 MobiDBLite consensus disorder prediction 51 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3581 Ahy-Chr19 158437987 158448694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3581 454 886 Glycoside Hydrolase AT3G48950 70.938 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3581 - - ahf:112777338 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3581 19 158437987 158448694 Ahy19g3581 19 158437987 158448694 ECH
Ahy19g3581 19 158437987 158448694 Ahy9g2042 9 108777911 108779667 hybridization
Ahy15g3586 15 158632810 158635861 Ahy19g3581 19 158437987 158448694 PCT
Ahy5g3172 5 113621664 113624586 Ahy19g3581 19 158437987 158448694 PCT
Ahy19g3581 19 158437987 158448694 Ahy15g3586 15 158632810 158635861 PCT
Ahy19g3581 19 158437987 158448694 Ahy5g3172 5 113621664 113624586 PCT