Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3586 ATGATGTTTGAGATAAACTCTTGTTTTGCACAGGTTGTTGGGTTTATCTGCACAATTTTGTTGTTGAGATCAGTAGCAGAATGCAGAGAGGTCAATGGTGTATTGGAGAATCTTGAGTACCCTGCAATTAGTTGCAGAAAACACAGTGCAAGTTTGATTGATTTTGGTGGAGTTGGTGATGGCAAAACATCCAATACAAAGGCCTTTCAATATGCAATTGGGAACCTGAGCCATTATGGTTCTGATGGTGGAGCATTGCTTGTTGTGCCACCTGGGAAATGGTTAACAGGAAGCTTCAATCTCACTAGCCATTTCACTCTTTTTCTCCACCGTGACACTATCATCCTCGCGTCTCAGGATGAATCAGAATGGCCTGAACTTTCTGTACTACCATCATATGGTAGAGGAAGAGACGCTCCTGATGGAAGGTTTAGTAGTCTCATTTTTGGAACAAACCTCACTGATGTTGTAGTTACTGGTTATAATGGGACAATTGATGGACAAGGCTCTTATTGGTGGGATAAGTTTCATAAGGGTGAATTGAAACTTACTAGACCATATATGATTGAGATTATGTTCTCTGATCACATTCAGATATCAAATCTCACTTTGATCAATTCCCCATCTTGGTTTGTCCATCCAATTTACAGCAGTGACATCATAATTCAAGGACTCACCATTGCTGCACCAACTGACTCTCCCAACACAGATGGAATAGACCCTGATTCTTGTACCAATACAAGGATTGAAGACTGCAATATTGTCTCTGGTGATGATTGTATTGCAGTTAAGAGTGGTTGGGATGAGTATGGAATAAAATTTGGAATGCCAAGCCAACACATAGTAATTAGAAGGCTTACATGTGTATCCCCTGATAGTGCTATGATTGCATTAGGCAGTGAAATGTCTGGTGGAATCCAAGATGTTAGAGCCGAAAACCTCACTGCTATCGATACTGAATCGGCCGTTAGGATCAAAACTGCAGTTGGTAGAGGAGGATATGTTAAGGACATATTTGTTAAGGGAATGAACTTGAACAACATGAAATATGTGTTTTGGATAACAGGTTCTTATGGATCACACGCTGACAATGATTTTGATCCAAAAGCACTTCCTGATATTAGTGGCATAAACTATAGAGATGTCATAGCAGATTACTGCAATTATACAGCAAAACTTGAAGGGATTCCTAATGATCCTTTTACAGGAATCTGTATATCTAATATGAGTATCACAAATAGTGACATGAAGAAATTGCAATGGAATTGCACTGATGTTGAAGGTGTTTCAAGCAATGTTAGTCCTGTCCCTTGTGAATTGCTATCACAGAAGGAAGAGAAGAAATTTGATTGTCCTTTTCCAGATGAGAAACTTCCCATTGAAAGTGTTATGTTGAAGACTTGTTCCTTTAAAAGTGTCTAA 1422 0.391 MMFEINSCFAQVVGFICTILLLRSVAECREVNGVLENLEYPAISCRKHSASLIDFGGVGDGKTSNTKAFQYAIGNLSHYGSDGGALLVVPPGKWLTGSFNLTSHFTLFLHRDTIILASQDESEWPELSVLPSYGRGRDAPDGRFSSLIFGTNLTDVVVTGYNGTIDGQGSYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYSSDIIIQGLTIAAPTDSPNTDGIDPDSCTNTRIEDCNIVSGDDCIAVKSGWDEYGIKFGMPSQHIVIRRLTCVSPDSAMIALGSEMSGGIQDVRAENLTAIDTESAVRIKTAVGRGGYVKDIFVKGMNLNNMKYVFWITGSYGSHADNDFDPKALPDISGINYRDVIADYCNYTAKLEGIPNDPFTGICISNMSITNSDMKKLQWNCTDVEGVSSNVSPVPCELLSQKEEKKFDCPFPDEKLPIESVMLKTCSFKSV* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3586 473 Pfam Glycosyl hydrolases family 28 146 427 IPR000743 GO:0004650|GO:0005975
Ahy15g3586 473 PANTHER ENDO-POLYGALACTURONASE-LIKE PROTEIN 17 469 - -
Ahy15g3586 473 SUPERFAMILY Pectin lyase-like 42 443 IPR011050 -
Ahy15g3586 473 Gene3D - 30 435 IPR012334 -
Ahy15g3586 473 PANTHER PECTIN LYASE-RELATED 17 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3586 Ahy-Chr15 158632810 158635861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3586 3 471 Glycoside Hydrolase AT3G61490 64.375 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3586 - - gmx:100812836 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3586 15 158632810 158635861 Ahy15g3586 15 158632810 158635861 ECH
Ahy15g3586 15 158632810 158635861 Ahy5g3172 5 113621664 113624586 hybridization
Ahy15g3586 15 158632810 158635861 Ahy19g3581 19 158437987 158448694 PCT
Ahy15g3586 15 158632810 158635861 Ahy9g2042 9 108777911 108779667 PCT
Ahy19g3581 19 158437987 158448694 Ahy15g3586 15 158632810 158635861 PCT
Ahy9g2042 9 108777911 108779667 Ahy15g3586 15 158632810 158635861 PCT