Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0182 ATGGAAAGCAATAACGTTCCAATAATGGCAAAGAAAGTGTGGAACATGGTACGTGTAGTATTCTTCATGCTTAGAAGAGGCATATCAAAGGGCAAGCTCGTGATGGATCTAAACATGTTCCTCAAGCGCCGCCGCAAGCTCGCCGGAAAAGCCATCTACAACCTCATGTTCCATCACCACCACCACTCAAACAACCCTAATCTACAGTTCTCCGCCCCAAGGGAGTACGAGTTCAGCTGCAGCAACACTCCCAACAACCACTACTTCTTCCCAATCGGCAAGCGCCACCGCAATCACAACCACCACTTCTTCGCATGCGCTCACGCGCCACCCACTCTCGACGACGACGTGGTCACCGCGAACGCGCTCAAGGCGGTGTTGGAGATCTTGAACAACAACAACAATAATAATGATCAGGTGATGATGGCTATGGTGGAGGCTTCGCCGGCGCTTCCAGGGTTCGGCCGGAGTCCAATGGTGAGGCAGCTGAGAGTGACGGACTCGCCGTTCCCGCTTCATAACGACGACAAAGACGACCACCAGGTTGATAAGGCGGCGGAAGAGTTCATCAAGAGGTTCTACACCGAGTTAAGGAAGCAAGATTAG 606 0.5231 MESNNVPIMAKKVWNMVRVVFFMLRRGISKGKLVMDLNMFLKRRRKLAGKAIYNLMFHHHHHSNNPNLQFSAPREYEFSCSNTPNNHYFFPIGKRHRNHNHHFFACAHAPPTLDDDVVTANALKAVLEILNNNNNNNDQVMMAMVEASPALPGFGRSPMVRQLRVTDSPFPLHNDDKDDHQVDKAAEEFIKRFYTELRKQD* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0182 201 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 200 - -
Ahy18g0182 201 Pfam Cotton fibre expressed protein 180 200 IPR008480 -
Ahy18g0182 201 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0182 Ahy-Chr18 1368740 1369557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0182 - - gmx:100786928 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0340 19 3944003 3945102 Ahy18g0182 18 1368740 1369557 ECH
Ahy15g2938 15 149513120 149514460 Ahy18g0182 18 1368740 1369557 ECH
Ahy18g0182 18 1368740 1369557 Ahy18g0182 18 1368740 1369557 ECH
Ahy18g0182 18 1368740 1369557 Ahy9g0269 9 3061090 3062048 PCT
Ahy9g0269 9 3061090 3062048 Ahy18g0182 18 1368740 1369557 PCT