Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0340 ATGGAAAGTAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGGCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACGCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTGTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCGTGACGGTCAGTGCTGTAAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGTCGAGGCATCCCCGGCGCTACCGGGGTTCGGCCGGAGCCCTACCGTGAGTCGGTTAAGGGTAACGGATTCACCGTTCCCAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTGGACAAGGCTGCCGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.5044 MESNLPVIAKKVWNIIRVAFYMLRKGISKGKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHADMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVVTVSAVKAVLEILNNNNDNVVEASPALPGFGRSPTVSRLRVTDSPFPMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0340 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
Ahy19g0340 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
Ahy19g0340 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0340 Ahy-Chr19 3944003 3945102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0340 - - gmx:100802625 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0340 19 3944003 3945102 Ahy18g0182 18 1368740 1369557 ECH
Ahy15g2938 15 149513120 149514460 Ahy19g0340 19 3944003 3945102 ECH
Ahy19g0340 19 3944003 3945102 Ahy19g0340 19 3944003 3945102 ECH