Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0269 ATGGAAAGCAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGCCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACCCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACCCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTCTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCATGACGGTTAGTGCTGTCAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGCCGAGGCATCCCCGGCGCTACCGGGGTTCGGCCGGAGCCCTACCGTGAGTCAGTTAAGGATAACGGATTCACCGTTTCTAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTAGACAAGGCTGCGGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.4974 MESNLPVIAKKVWNIIRVAFYMLRKGISKAKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHPDMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVMTVSAVKAVLEILNNNNDNVAEASPALPGFGRSPTVSQLRITDSPFLMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0269 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
Ahy9g0269 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
Ahy9g0269 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0269 Ahy-Chr9 3061090 3062048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0269 - - gsj:114386903 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0182 18 1368740 1369557 Ahy9g0269 9 3061090 3062048 PCT
Ahy9g0269 9 3061090 3062048 Ahy18g0182 18 1368740 1369557 PCT