Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1496 ATGCCGACGCCGGTAAGCGCAGCGAGGCAATGCTTGACAGACGAGGCGGCACGTGCTCTCGACGACGCTGTCGCGGTGGCGCGTCGCCGGAGCCACGCCCAGACGACCTCCCTCCACGCAGTCTCCGCTCTCTTGGCCCTCCCTTCCTCCTCCCTCCGCGACGCAATCACCCGATCTCGCACCGTCGTCACCGCCGTAGCCGCAGCCGTAACCGTCTCCCCGCGCCTCCAGCTGCGCGCCCTAGAACTCTCCGTCGGCGTGTCCCTCGACCGCCTCCCCTCCTCTAAACCCTCATCGACCTCCTCCACCGCCGACGACGACGGACCTCCGGTGTCGAATTCCCTCATGGCGGCCATAAAACGCTCCCAGGCGAACCAACGGCGCCACCCGGATACCTTCCACTTGATGCAAATCCACAATCACCAAAACCCTCAGTTCAATCAAGGAACCGCATCGTTTCTGAAAGTTGAGCTCAAACACTTCGTTCTTTCAATCTTAGATGATCCAATCGTGAGTCGCGTCTTCGGCGAAGCGGGTTTTCGGAGCCCCGACATAAAACTCGCACTTCTTCAGCCTCCTAACCCTCCGCCTTCTTCCAGAATCTTCTCAAGAACGCGCTACCCGCCCCCTCTCTTCCTCTGCAGTCTTGACTCGGGTCGACCCGGACCCGGTTTCTCTTCCGGGTTCCCATTCCTGGACGAGAACTGCAGAAGGGTTGCGGATATTCTAACGCGGAAGAACAAGAGAAACCCTTTGCTTATGGGTGTTTACGCGAAAACCGCGCTCAGAAGCTTCGTTGAGATGATCGAGAAGGGTCGTGGTGTTGCAATGTTCCCACCAGAAATGGCTGCGGTTAATGTCATCTCGGTGGAGAACGAGATTCAAGAATTCTTGATTTCTGGCGCCATGAGTGAGGAGAAGATGGGGTTGAGGTTTGAGGAGTTGGGTCGAGAAGCCGATCAATGCTCCAATGGTGGTGGTGTTGTTGTGAGCTTTGGGGATGTTGCGGCTTTTGTTAAAGATGGAGTGGATAGTGGTGCTGTTGGGTTTGTTCTTTCGAGGATAACGAGGTTGTTGTTGGACGGTGGTGGGGGTGGAGGGAAGGTTTGGTTGGTTGGGGTGGCGGAGAAGTGTGATGCGTATTCAAAGTTATTGGGTTTGTTCCCAAATGTGGAAAAAGATTGGGATCTGTATCCTATGACCGTCACGTCTGCTACACCTTCAATGGAAGGACTCTACCCTAAATCCAGCTTGATGGGGTCCTTCATTCCATTTGGTGGGTTCTTTTCTACACCACCTGAAATCAAAACTCCTGTAAGCTGTTCAAGTGCATCTTTTGCGCGTTGTGACGAATGCAATGAAAAATATGAAGAAGAAGTTGCTGATTTGAAGGTTAATGAAGAAAGCACAAGTTTGAACGAGAGGATCCTGGGTTGTCAAAAGAAATGGAACGACATTTGCCGTAATCTTCATCACACTAGATCAGTTGATAATTCTCAAACAAGACCTCAAGCTCCATCACTTGAGGGTTTACGGTTTGGCTCTGGGTTTACGGAAAGCGGCAGTAAAGATCCATCACACATAGAAGTCCAATATTCTAATCAAACTTCCTACCTACCTAGAGAGCCGCCTAGTATTTATCCATTGAAACAGTTGCCATCTGTTCCGGAATCTTCTGATACAGCCAGTATCAGTACCGGAACTGATCATGTACTGAAATTTTCAGGGATTCAGTTGACTGATGTGCGGATGCCATGGATTGCCCCTTCCTCTATGGCCAATACAAGTCTTCTTGATCACAGTTCATCTTCATCCCTTACACCTGTGACCACAGATTTAGGATTGGGCACAATATATACATCAGCAGCTCAAGAGCCAGATACCCCAAAACTACAGGATCACAAAAAGCATCTTCCAAACTTGTCGGAATCTCTGTCAATTGATTTTTTTGATGCCCCAAATGAGAATGCTTCACACCAAACACCTAGATCTGCTTGCTCTTTTCCAAATTCAGAAGGAAATTTTGATTCGGTAGATCTCAAATCTCTAAATCAACTTCTTGCTGAAAAGGTTGGCTGGCAAGATGATGCCATCTATGCAATAAATCGAAGTCTGTTCCTTTGTAATTCTGGTGCAGGAAAACGTAAAGGCTCCAGAGCTGGCATATGGTTTGCTTTCCTTGGACCAGATAGGATCAGCAAAAAGAAAATTGCTGCAGCTCTTGCAGAGATTATATTTGGAAACAGAGAAAATCTAATATCCGTAGATCTAAGCTTGCAGGACAGGTCTTTCTCATTGAACTCTGTTTTTGATTGCGAAATATCACATTGTCATGATGCGCTGAGAAGGAAGACTGTTGTGGATTATATTGCTGGGGAGTTGAGTAAAAGGCCACTTTCGGTTGTTTTTCTTGATCATGTCGATAAAGCTGATTACCTTGTGCAGACTAGTTTGTCACAGGCGTTAAAAACAGGTAAATTTCCAGATTCTCATGGAAGGGAAATCAGCATCAACAACAGAATCTTTATAGTAGCCTCAACTGTCAGTAAAGGTAATAGTAATAGCTCTTCTATATCCGAGGGATCGAAAATGTTCTCTGAGGAAAGAATCCTTGAAGCCAAGAAATTTCAAATGCAGCTAATACTTGGACATACTGCATCTGAGGATGCCATAAAAAGGGGTATCACAAATGTTCAGGTTATTCGTGGAAAAGGGTCCTCCAAACCACCATTTCTTAGCAAAAGGAAGCAAGCTGATACTAATGACTCCAAAGAGGTGGGAAACACATGCAAGATGCAGAAACAGGTCAGGGAGAAATCAAGATCCTATCTGGATCTAAACATGCCTCTAAACGAGGCCGAAGAATGCATCAATGACAATGACAACGAGATGGAAAACTCAGGAGCATGTTCCACTGATATCTGTAATCAAATTGAAGAAAAAGTGTTATTTAAGCCATTCAATTTTGATGCACTTGCTGATGAATTGTTGAAAAGCATTAGCACACAATTCCAGAGAGCATTTAGTTCAGATTTTCAGCTGGAAATTGAATATGATGTAATGGTACAGATTCTTGCAGCTGCATGGTTATCAGAGAAGAAAAATGCAGTGGAGGATTGGATTGAACGTGTTCTTGGAAGAGCTTTTGCTGAAGCCAAACAGAAAAAACACAGTGCATCACCATCTCAGTATGTGATGAAACTGGTCAACTGTGAATCCAATTTTGTGGAAGAGAATGCTCCTGGTGGATTGTGTCTTCCTTCTAGAATTAACCTCAACTGA 3282 0.4628 MPTPVSAARQCLTDEAARALDDAVAVARRRSHAQTTSLHAVSALLALPSSSLRDAITRSRTVVTAVAAAVTVSPRLQLRALELSVGVSLDRLPSSKPSSTSSTADDDGPPVSNSLMAAIKRSQANQRRHPDTFHLMQIHNHQNPQFNQGTASFLKVELKHFVLSILDDPIVSRVFGEAGFRSPDIKLALLQPPNPPPSSRIFSRTRYPPPLFLCSLDSGRPGPGFSSGFPFLDENCRRVADILTRKNKRNPLLMGVYAKTALRSFVEMIEKGRGVAMFPPEMAAVNVISVENEIQEFLISGAMSEEKMGLRFEELGREADQCSNGGGVVVSFGDVAAFVKDGVDSGAVGFVLSRITRLLLDGGGGGGKVWLVGVAEKCDAYSKLLGLFPNVEKDWDLYPMTVTSATPSMEGLYPKSSLMGSFIPFGGFFSTPPEIKTPVSCSSASFARCDECNEKYEEEVADLKVNEESTSLNERILGCQKKWNDICRNLHHTRSVDNSQTRPQAPSLEGLRFGSGFTESGSKDPSHIEVQYSNQTSYLPREPPSIYPLKQLPSVPESSDTASISTGTDHVLKFSGIQLTDVRMPWIAPSSMANTSLLDHSSSSSLTPVTTDLGLGTIYTSAAQEPDTPKLQDHKKHLPNLSESLSIDFFDAPNENASHQTPRSACSFPNSEGNFDSVDLKSLNQLLAEKVGWQDDAIYAINRSLFLCNSGAGKRKGSRAGIWFAFLGPDRISKKKIAAALAEIIFGNRENLISVDLSLQDRSFSLNSVFDCEISHCHDALRRKTVVDYIAGELSKRPLSVVFLDHVDKADYLVQTSLSQALKTGKFPDSHGREISINNRIFIVASTVSKGNSNSSSISEGSKMFSEERILEAKKFQMQLILGHTASEDAIKRGITNVQVIRGKGSSKPPFLSKRKQADTNDSKEVGNTCKMQKQVREKSRSYLDLNMPLNEAEECINDNDNEMENSGACSTDICNQIEEKVLFKPFNFDALADELLKSISTQFQRAFSSDFQLEIEYDVMVQILAAAWLSEKKNAVEDWIERVLGRAFAEAKQKKHSASPSQYVMKLVNCESNFVEENAPGGLCLPSRINLN* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1496 1093 MobiDBLite consensus disorder prediction 91 109 - -
Ahy17g1496 1093 MobiDBLite consensus disorder prediction 905 927 - -
Ahy17g1496 1093 MobiDBLite consensus disorder prediction 519 541 - -
Ahy17g1496 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 848 IPR027417 -
Ahy17g1496 1093 Pfam AAA domain (Cdc48 subfamily) 723 877 IPR003959 GO:0005524|GO:0016887
Ahy17g1496 1093 Coils Coil 453 473 - -
Ahy17g1496 1093 ProSiteProfiles Clp repeat (R) domain profile. 8 195 IPR004176 -
Ahy17g1496 1093 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 463 - -
Ahy17g1496 1093 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 464 1093 - -
Ahy17g1496 1093 MobiDBLite consensus disorder prediction 495 565 - -
Ahy17g1496 1093 MobiDBLite consensus disorder prediction 91 113 - -
Ahy17g1496 1093 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 463 - -
Ahy17g1496 1093 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 464 1093 - -
Ahy17g1496 1093 CDD AAA 737 847 - -
Ahy17g1496 1093 Gene3D - 10 192 IPR036628 -
Ahy17g1496 1093 Gene3D - 670 900 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1496 Ahy-Chr17 28479974 28485117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1496 - - ahf:112702898 1968.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1496 17 28479974 28485117 Ahy17g1496 17 28479974 28485117 ECH
Ahy17g1496 17 28479974 28485117 Ahy20g1399 20 32645649 32650011 ECH
Ahy12g2887 12 118607175 118611854 Ahy17g1496 17 28479974 28485117 ECH
Ahy17g1496 17 28479974 28485117 Ahy7g1336 7 28709328 28714430 hybridization
Ahy17g1496 17 28479974 28485117 Ahy17g1496 17 28479974 28485117 PCT
Ahy17g1496 17 28479974 28485117 Ahy7g1336 7 28709328 28714430 PCT
Ahy7g1336 7 28709328 28714430 Ahy17g1496 17 28479974 28485117 PCT