Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1336 ATGCCGACGCCGGTAAGCGCAGCGAGGCAATGCTTGACAGACGAGGCGGCACGTGCTCTCGACGACGCTGTCGCGGTGGCGCGTCGCCGGAGCCACGCCCAGACGACCTCCCTCCACGCAGTCTCTGCTCTCTTGGCCCTCCCTTCCTCCTCCCTCCGCGACGCAATCACCCGATCTCGCACCGTCGTCACCGCCGTAGCCGCAGCCGTAACCGTCTCCCCGCGCCTCCAGCTGCGCGCCCTAGAACTCTCCGTCGGCGTGTCCCTCGACCGCCTCCCCTCCTCCAAACCCTCATCTATCTCCTCCACCGCCGACGACGACGGACCTCCGGTGTCGAATTCCCTCATGGCGGCCATAAAACGCTCCCAGGCGAACCAACGGCGCCACCCGGATACCTTCCACTTGATGCAAATCCACAATCACCAAAACCCTCAGTTCAATCAAGGAACGGCGTCGTTTCTGAAAGTTGAGCTCAAACACTTCGTTCTTTCAATCTTAGATGATCCAATCGTGAGTCGCGTCTTCGGCGAAGCGGGTTTTCGGAGCCCCGACATAAAACTCGCACTTCTTCAGCCTCCTAACCCTCCGCCTTCTTCTAGAATCTTCTCAAGAACGCGCTACCCGCCCCCCCTCTTCCTCTGCAGTCTTGAATCGGGTCAACCCGGACCCGGTTTCTCTTCCGGGTTCCCATTCCTGGACGAGAACTGCAGAAGGGTTGCGGATATTCTAACGCGGAAGAACAAGAGAAACCCTTTGCTTATGGGTGTTTACGCGAAAACCGCGCTCAGAAGCTTCGTTGAGATGATCGAGAAGGGTCGTGGTGTTGCAATGTTCCCACCAGAAATGGCTGCGGTTAATGTCATCTCGGTGGAGAACGAGATTCAAGAATTCTTGATTTCTGGCGCCATGAGTGAGGAGAAGATGGGGTTGAGGTTTGAGGAGTTGGGCCGAGAAGCCGGTCAATGCTCCAATGGTGGTGGTGTTGTTGTGAGCTTTGGGGATGTTGGGGCTTTTGTTAAAGATGGAGTGGATAGTGGTGCTGTTGGGTTTGTTCTTTCGAGGATAACGAGGTTGTTGTTGGACGGTGGTGGTGGTGGAGGGAAGGTTTGGTTGGTTGGGGTGGCGGAGAAGTGTGATGTGTATTCGAAGTTATTGGGTTTGTTCCCAAATGTGGAAAAGGATTGGGATCTGTATCCTATAACCGTGACATCTGCTACCCCTTCAATGGAAGGACTCTACCCTAAATCCAGCTTGATGGGGTCCTTCATTCCGTTTGGTGGGTTCTTTTCTACACCACCTGAAATCAAAACTCCTGTAAGCTGTTCAAGTGCATCTTCTGCGCGTTGTGACGAATGCAATGAAAAATATGAAGAAGAAGTTGCTGATTTGAAGGTAGGCTCTGCTACTCTGCCATCTGTTTACTTAAGCTTTCCTTGGTTACAAAATGCTGATTTGAACTTTCATAGAGGATTGGATTTGGCAAAGGTTAATGAAGAAAGCACAAGTTTGAACGAGAGGATCCTGGGTTGTCAAAAGAAATGGAACGACATTTGCCGTAATCTTCATCACACCAGATCAGTTGATAATTCTCAAACAAGACCTCAAGCTCCATCACTTGAGGGTTTACGGTTTGGCTCTGGGTTTACGGAAAGCGGCAGTAAAGATCCATCACATATAGATGTCCAATATTCTAATCAAACTTCCTACCTACCTAGAGAGCCGCCTAGTATTTATCCATTGAAACAGTTGCCATCTGTTCTGGAATCTTCTGATGCAGCCAGCATCAGTAGCGGAACTGATCATGCACTGAAATTTTCAGGGATTCAGTTGACTGATGTGCGGACGCCATGGATTGCCCCTTCCTCTATGGCCAATACAAGTCTTCTTGATCACAGTTCATCTTCATCCCTTACACCTGTGACGACAGATTTAGGATTGGGCACAATATATACATCAGCAGCTCAAGAGCCAGATACCCCAAAACTACAGGATCACAAAAAGCATCTTCCAAACTTGTCGGAATCTCTGTCAATTGATTTTTTTGATGCCCCAAATGAGAATACTTCACACCAAACACCTAGATCTGCTTGCTCTTTTCCAAATTCAGAAGGAAATTTTGATTCGGTAGATCTCAAATCTCTAAATCAACTTCTCGCTGAAAAGGTTGGCTGGCAAGATGATGCCATCTATGCAATAAATCGAAGGCTGTTCCTTTGTAATTCCGGTGCAGGAAAACGTAAAGGCTCCAGAGCTGGCATATGGTTTGCTTTCCTTGGACCAGATAGGATCAGCAAAAAGAAAATTGCTGCAGCTCTTGCAGAGATTATATTTGGAAACAGAGAAAATCTAATATCCGTAGATCTAAGCTTGCTGGACAGGTCTTTCTCATTGAACTCTGTTTTTGATTGCCAAATATCACATTGTCATGATGCGCTGAGAAGGAAGACTGTTGTGGACTATATTGCTGGGGAGTTGAGTAAAAGGCCACTTTCGGTTGTTTTTCTTGATCATGTCGATAAAGCTGATTACCTTGTGCAGACTAGTTTGTCACAGGCATTAAAAACTGGTAAATTTCCAGATTCTCATGGAAGGGAAATCAGCATCAACAACAGAATCTTTATAGTAGCCTCGACTGTCAGTAAAGGTAATAGTAATAGCTCTTCTATATCCGAGGGATCGAAAATGTTCTCTGAGGAAAGAATCCTTGAAGCCAAGAAATTTCAAATGCAGCTAATACTTGGACATACCGCATCTGAGGATGCCATTAAAAGGGGTATCACAAATGTCCACGTTATTCGTGGAAAAGGGTCCTCCAAACCACCATTTCTTAGCAAAAGGAAGCAAGCTGATACTAATGACTCCAAAGAGGTGGGAAACACATGCAAGATGCAGAAACAGGTCAGGGAGAAATCAAGATCCTATCTGGATCTAAACATGCCGCTAAACGAGGCCGAAGAATGCATCAATGATAATGACAACGAGATGGAAAACTCAGGAGCATGTTCCACTGATATCTGTCTTCAAATTGAAGAAAAAGTGTTATTCAAGCCATTCAATTTTGATGCACTTGCTGATGAATTGTTGAAAAGCATTAGCACACAATTCCAGAGAGCACTTGGTTCAGATTTTCAGCTGGAAATTGAATATGATGTAATGGTACAAATTCTTGCAGCTGCATGGTTATCAGAGAAGAAAAATGCAGTGGAGGATTGGATTGAACGTGTTCTTGGAAGAGCTTTTGCTGAAGCCAAACAAAAAAAACACCGTGCATCACCATCTCAGTATGTGATGAAACTGGTCAACTGTGAATCCAATTTTGTGGAAGAGAATGCTCCTGGTGGATTGTGTCTTCCTTCTAGAATTAACCTCAACTGA 3375 0.4643 MPTPVSAARQCLTDEAARALDDAVAVARRRSHAQTTSLHAVSALLALPSSSLRDAITRSRTVVTAVAAAVTVSPRLQLRALELSVGVSLDRLPSSKPSSISSTADDDGPPVSNSLMAAIKRSQANQRRHPDTFHLMQIHNHQNPQFNQGTASFLKVELKHFVLSILDDPIVSRVFGEAGFRSPDIKLALLQPPNPPPSSRIFSRTRYPPPLFLCSLESGQPGPGFSSGFPFLDENCRRVADILTRKNKRNPLLMGVYAKTALRSFVEMIEKGRGVAMFPPEMAAVNVISVENEIQEFLISGAMSEEKMGLRFEELGREAGQCSNGGGVVVSFGDVGAFVKDGVDSGAVGFVLSRITRLLLDGGGGGGKVWLVGVAEKCDVYSKLLGLFPNVEKDWDLYPITVTSATPSMEGLYPKSSLMGSFIPFGGFFSTPPEIKTPVSCSSASSARCDECNEKYEEEVADLKVGSATLPSVYLSFPWLQNADLNFHRGLDLAKVNEESTSLNERILGCQKKWNDICRNLHHTRSVDNSQTRPQAPSLEGLRFGSGFTESGSKDPSHIDVQYSNQTSYLPREPPSIYPLKQLPSVLESSDAASISSGTDHALKFSGIQLTDVRTPWIAPSSMANTSLLDHSSSSSLTPVTTDLGLGTIYTSAAQEPDTPKLQDHKKHLPNLSESLSIDFFDAPNENTSHQTPRSACSFPNSEGNFDSVDLKSLNQLLAEKVGWQDDAIYAINRRLFLCNSGAGKRKGSRAGIWFAFLGPDRISKKKIAAALAEIIFGNRENLISVDLSLLDRSFSLNSVFDCQISHCHDALRRKTVVDYIAGELSKRPLSVVFLDHVDKADYLVQTSLSQALKTGKFPDSHGREISINNRIFIVASTVSKGNSNSSSISEGSKMFSEERILEAKKFQMQLILGHTASEDAIKRGITNVHVIRGKGSSKPPFLSKRKQADTNDSKEVGNTCKMQKQVREKSRSYLDLNMPLNEAEECINDNDNEMENSGACSTDICLQIEEKVLFKPFNFDALADELLKSISTQFQRALGSDFQLEIEYDVMVQILAAAWLSEKKNAVEDWIERVLGRAFAEAKQKKHRASPSQYVMKLVNCESNFVEENAPGGLCLPSRINLN* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1336 1124 Pfam AAA domain (Cdc48 subfamily) 754 908 IPR003959 GO:0005524|GO:0016887
Ahy7g1336 1124 MobiDBLite consensus disorder prediction 92 109 - -
Ahy7g1336 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 879 IPR027417 -
Ahy7g1336 1124 Gene3D - 10 192 IPR036628 -
Ahy7g1336 1124 CDD AAA 768 878 - -
Ahy7g1336 1124 Gene3D - 701 929 IPR027417 -
Ahy7g1336 1124 MobiDBLite consensus disorder prediction 92 111 - -
Ahy7g1336 1124 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1124 - -
Ahy7g1336 1124 ProSiteProfiles Clp repeat (R) domain profile. 8 195 IPR004176 -
Ahy7g1336 1124 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1124 - -
Ahy7g1336 1124 MobiDBLite consensus disorder prediction 936 958 - -
Ahy7g1336 1124 MobiDBLite consensus disorder prediction 526 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1336 Ahy-Chr7 28709328 28714430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1336 - - ahf:112702898 2095.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1496 17 28479974 28485117 Ahy7g1336 7 28709328 28714430 hybridization
Ahy17g1496 17 28479974 28485117 Ahy7g1336 7 28709328 28714430 PCT
Ahy7g1336 7 28709328 28714430 Ahy17g1496 17 28479974 28485117 PCT