Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1493 ATGGCAGTGTCCCATGTTGTTTATACCAATGGACACAAAAAAGAAAATGATGAATTTGATGCTAGTGCTCCTCCTCCATTCAAGATAGCAGATATAAGAGCTGCAATCCCAAGGCATTGCTGGGTCAAGAATCCATGGAGATCCCTCAGTTATGTTCTAAGAGATTTGGTTCTTGTTGCTACATTGTTAGCTTCAGCAATTCACTTCAATAGTTGGTTCTTTTGGCCAATCTATTGGCCTCTTCAGGGAACAATGTTCTGGGCACTCTTTGTTCTTGGTCATGATTGTGGGCATGGAAGTTTTTCAAACAATGCAAAGCTGAATAGTATTGTGGGCCATATATTGCACTCCTCAATTCTTGTACCATACCATGGATGGAGAATTAGCCACAAGACCCACCACCAAAACCATGGACATGTTGAGAATGATGAGTCATGGGTTCCATTGCCAGAGAAGATCTATAAAAGCCTAGACAATGTGACCAAACTCATGAGATTCACTGTACCTTTCCCTATTTTTGCTTATCCCTTTTACTTGTGGAGAAGAAGCCCTGGAAAGGAAGGTTCTCATTTCAATCCATACAGCAATTTGTTCTCACCAAATGAGAGAAAAGATGTTATGATTTCAACAATGTGTTGGGTTGCCATGTTTTCTCTGCTTCTCTTTCTGTCCTTCATTGTCACTCCACTTTCCATTCTCAAGCTCTATGGAATCCCTTATTTGATCTTCATCATGTGGCTTGATTTTGTCACATACTTGCATCACCATGGTTACAAGCAGAAATTACCTTGGTACCGTGGAAAGGAATGGAGTTATCTAAGGGGTGGCCTTACAACGGTGGATCGTGACTATGGTTTGGTTAATAATATTCATCATGATATTGGCACTCATGTGATCCATCATCTTTTCCCTCAAATTCCTCACTATCACTTGCTTGAAGCGACAGAAGCAGCAAAGCCAGTACTTGGAAAGTATTACCGGGAGCCAGAGAAATCTGGGCCACTTCCATTTCATCTCATAAAGTATTTGCTACAAAGCATTGGACAAGATCACTATGTCAGTGACAATGGAGATATTGTTTACTATCAATCTGATCCTTACCTTCTCAACAATAACAAGTCCAAGTAG 1128 0.406 MAVSHVVYTNGHKKENDEFDASAPPPFKIADIRAAIPRHCWVKNPWRSLSYVLRDLVLVATLLASAIHFNSWFFWPIYWPLQGTMFWALFVLGHDCGHGSFSNNAKLNSIVGHILHSSILVPYHGWRISHKTHHQNHGHVENDESWVPLPEKIYKSLDNVTKLMRFTVPFPIFAYPFYLWRRSPGKEGSHFNPYSNLFSPNERKDVMISTMCWVAMFSLLLFLSFIVTPLSILKLYGIPYLIFIMWLDFVTYLHHHGYKQKLPWYRGKEWSYLRGGLTTVDRDYGLVNNIHHDIGTHVIHHLFPQIPHYHLLEATEAAKPVLGKYYREPEKSGPLPFHLIKYLLQSIGQDHYVSDNGDIVYYQSDPYLLNNNKSK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1493 375 Pfam Fatty acid desaturase 74 326 IPR005804 GO:0006629
Ahy17g1493 375 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 12 373 - -
Ahy17g1493 375 CDD Delta12-FADS-like 43 311 - -
Ahy17g1493 375 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 12 373 - -
Ahy17g1493 375 Pfam Domain of unknown function (DUF3474) 9 63 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1493 Ahy-Chr17 28109951 28113373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1493 13 375 Lipid Metabolism Gene Families AT3G11170 71.901 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1493 K10257 - gmx:547470 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1493 17 28109951 28113373 Ahy17g1493 17 28109951 28113373 ECH
Ahy11g0392 11 5085172 5089348 Ahy17g1493 17 28109951 28113373 ECH
Ahy14g1898 14 108697478 108700664 Ahy17g1493 17 28109951 28113373 ECH
Ahy12g2044 12 104568665 104573425 Ahy17g1493 17 28109951 28113373 ECH
Ahy17g1493 17 28109951 28113373 Ahy7g1230 7 22296288 22299970 hybridization
Ahy17g1493 17 28109951 28113373 Ahy17g1493 17 28109951 28113373 PCT
Ahy17g1493 17 28109951 28113373 Ahy7g1230 7 22296288 22299970 PCT
Ahy7g1230 7 22296288 22299970 Ahy17g1493 17 28109951 28113373 PCT