Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0392 ATGTGGAATTTGGAAAATTCATTCAACAACCATCTTAGCTTTATACGCATCTCATATGCTAAAAACCCTCCCCATTCACCACCACATAACCCTCATTCTCTAACATTTTCTCTCCCACACACTAACTTGAAGGAGAGAAAGAAAGAATTGGAAGAACCAAACATGGTTGCCTTGGAACAAGTAGAACATCATCATCATCATGAAAAAACACATGTTCATGTTGTTAATAATGACAATAATGGTTCTTGTGATGATGATTTTGATCCAAGTGCACCTCCACCCTTCAAGATTGCAGAGATAAGAAGAGCAATTCCAAAGCATTGTTGGAAGAAGGACACGTGGCGGTCATTAAGATATGTCCTTAGAGATGTTCTTATAGTCACTGCATTTATGGCTCTTGCAATTGCTTTCAGTAGCTGGTTCTTCTGGCCATTCTATTGGCTTGCTCAGGGTACAATGTTCTGGGCTCTTTTTGTTCTTGGACATGATTGTGGCCATGGAAGCTTTTCAGAGAGTCCTAAGCTGAATAGCATTGTGGGCCATATCTTACACTCATTCATCCTTGTACCATACCATGGATGGAGAATTAGTCATAGAACTCACCATCAAAACCATGGACACGTTGAGCATGATGAATCATGGGTTCCTCTGACAGAGAAGATTTACAAGAATCTAGATAACACAACAAGAATCCTAAGATTCACATTGCCTTTTCCAATCTTTGCATACCCCTTTTATTTGTGGAAAAGAAGCCCTGGAAAAGAAGGGTCTCACTTTAATCCCTACAGCAAATTGTTCTCCCCTGATGAGAGAAAAGATGTATTAACATCAACTCTCTGTTGGATTGCCATGTTCTCTTTGCTTATTTATTTGTCCTTCGCAATGGGTCCAATTTTGATTCTCAAGCTCTATGGAGTCCCTTATTCGATCTTCGTAATGTGGTTGGACTTCGTCACATATTTGCATCACCATGGTTACAAGCAGAAATTACCATGGTACCGTGGCAAGGAATGGGATTACCTAAGGGGTGGTCTTACAACTGTGGATCGAGACTATGGTTGGGTTAATAAAATTCACCATGACATTGGCACCCATGTCATCCATCATCTTTTCCCTCAAATTCCCCATTACCATTTAGTTGAAGCGACAGAATCAGCAAAGGGAGTTCTTGGAGAATATTATAGGGAGCCAGAGAAATCAGGTCCAATCCCATTGCATCTAATAAAGTATTTGCTGCACAGTGTAAAGCATGATCACTTCGTCAGTGACTTTGGGGACATTGTGTTCTACCAAACAGACCCTCAACATTCTTCGGACAAGTCTAAATGA 1329 0.4048 MWNLENSFNNHLSFIRISYAKNPPHSPPHNPHSLTFSLPHTNLKERKKELEEPNMVALEQVEHHHHHEKTHVHVVNNDNNGSCDDDFDPSAPPPFKIAEIRRAIPKHCWKKDTWRSLRYVLRDVLIVTAFMALAIAFSSWFFWPFYWLAQGTMFWALFVLGHDCGHGSFSESPKLNSIVGHILHSFILVPYHGWRISHRTHHQNHGHVEHDESWVPLTEKIYKNLDNTTRILRFTLPFPIFAYPFYLWKRSPGKEGSHFNPYSKLFSPDERKDVLTSTLCWIAMFSLLIYLSFAMGPILILKLYGVPYSIFVMWLDFVTYLHHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNKIHHDIGTHVIHHLFPQIPHYHLVEATESAKGVLGEYYREPEKSGPIPLHLIKYLLHSVKHDHFVSDFGDIVFYQTDPQHSSDKSK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0392 442 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 47 438 - -
Ahy11g0392 442 Pfam Domain of unknown function (DUF3474) 54 130 IPR021863 GO:0016717
Ahy11g0392 442 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 47 438 - -
Ahy11g0392 442 Pfam Fatty acid desaturase 140 394 IPR005804 GO:0006629
Ahy11g0392 442 CDD Delta12-FADS-like 111 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0392 Ahy-Chr11 5085172 5089348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0392 87 435 Lipid Metabolism Gene Families AT3G11170 73.352 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0392 K10257 - gmx:547470 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0392 11 5085172 5089348 Ahy11g0392 11 5085172 5089348 ECH
Ahy11g0392 11 5085172 5089348 Ahy17g1493 17 28109951 28113373 ECH