Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1230 ATGGCAGTGTCCCATGTTGTTTATACCAATGGACACAAAAAAGAAAATGATGAATTTGATGCTAGTGCTCCTCCTCCATTCAAGATAGCAGATATAAGAGCTGCAATCCCAAGGCATTGCTGGGTCAAGAATCCATGGAGATCCCTCAGTTATGTTCTAAGAGATTTGGTTCTTGTTGCTACATTGTTAGCTTCAGCAATTCACTTCAATAGTTGGTTCTTTTGGCCAATCTATTGGCCTCTTCAGGGAACAATGTTCTGGGCACTCTTTGTTCTTGGTCATGATTGTGGGCATGGAAGTTTTTCAAACAATGCAAAGCTGAATAGTATTGTGGGCCATATATTGCACTCCTCAATTCTTGTACCATACCATGGATGGAGAATTAGCCACAAGACCCACCACCAAAACCATGGACATGTTGAGAATGATGAGTCATGGGTTCCATTGCCAGAGAAGATCTATAAAAGCCTAGACAATGTGACCAAACTCATGAGATTCACTGTACCTTTCCCTATTTTTGCTTATCCCTTTTACTTGTGGAGAAGAAGCCCTGGAAAGGAAGGTTCTCATTTCAATCCATACAGCAAATTGTTCTCACCAAATGAGAGAAAAGATGTTATGATTTCAACAATGTGTTGGGTTGCCATGTTTTCTCTGCTTCTCTTTCTGTCCTTCATTGTCACTCCACTTTCCATTCTCAAGCTCTATGGAATCCCTTATTTGATCTTCATCATGTGGCTTGATTTTGTCACATATTTGCATCACCATGGTTACAAGCAGAAATTACCTTGGTACCGTGGAAAGGAATGGAGTTATCTAAGGGGTGGCCTTACAACGGTGGATCGTGACTATGGTTTGGTTAATAATATTCATCATGATATTGGCACTCATGTGATCCATCATCTTTTCCCTCAAATTCCTCACTATCACTTGCTTGAAGCGACAGAAGCAGCAAAGCCAGTACTTGGAAAGTATTACCGGGAGCCAGAGAAATCTGGGCCACTTCCATTTCATCTCATAAAGTATTTGCTACAAAGCATTGGGCAAGATCACTATGTCAGTGACAATGGAGATATTGTTTACTATCAATCTGATCCTTACCTTCTCAACAACAATAACAAGTCCAACTAG 1131 0.4058 MAVSHVVYTNGHKKENDEFDASAPPPFKIADIRAAIPRHCWVKNPWRSLSYVLRDLVLVATLLASAIHFNSWFFWPIYWPLQGTMFWALFVLGHDCGHGSFSNNAKLNSIVGHILHSSILVPYHGWRISHKTHHQNHGHVENDESWVPLPEKIYKSLDNVTKLMRFTVPFPIFAYPFYLWRRSPGKEGSHFNPYSKLFSPNERKDVMISTMCWVAMFSLLLFLSFIVTPLSILKLYGIPYLIFIMWLDFVTYLHHHGYKQKLPWYRGKEWSYLRGGLTTVDRDYGLVNNIHHDIGTHVIHHLFPQIPHYHLLEATEAAKPVLGKYYREPEKSGPLPFHLIKYLLQSIGQDHYVSDNGDIVYYQSDPYLLNNNNKSN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1230 376 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 12 372 - -
Ahy7g1230 376 CDD Delta12-FADS-like 43 311 - -
Ahy7g1230 376 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 12 372 - -
Ahy7g1230 376 Pfam Domain of unknown function (DUF3474) 9 63 IPR021863 GO:0016717
Ahy7g1230 376 Pfam Fatty acid desaturase 74 326 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1230 Ahy-Chr7 22296288 22299970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1230 13 368 Lipid Metabolism Gene Families AT3G11170 73.034 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1230 K10257 - gmx:547470 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1493 17 28109951 28113373 Ahy7g1230 7 22296288 22299970 hybridization
Ahy17g1493 17 28109951 28113373 Ahy7g1230 7 22296288 22299970 PCT
Ahy7g1230 7 22296288 22299970 Ahy17g1493 17 28109951 28113373 PCT
Ahy7g1230 7 22296288 22299970 Ahy7g1230 7 22296288 22299970 PCT