Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1898 ATGGCAACTTGGGTTTTATCAGAATGTGGCTTAAAGCCTCTTCCACCAACATTCCCTAGACCCAAAACTGGTATTGTTAATTCTAACTCTAACCCTTCAAAGGTTAGATTTTTAAGCACAAAAAACAATGGTGTTTCTTTTTCAGATCCAAAGTTTCAATCCAGAAGAAGCTTTACAAGTTCTAGCTTCAGGGATAGAAACTTTGGGTTAAGGGTTAGTGCCCCTTTGAGGGTTAGCCCTATTGAAGAAGAGGAAGTGAAGAAAGATGTGAAAATCAATGGTGGTGGTGTTGAGAATGAAGTTGGTGAATTTGACCCTGGAGCACCACCACCATTCAATTTGGCTGATATTAGGGCAGCAATACCAAAGCATTGTTGGGTGAAAGATCCATGGAAGTCAATGAGCTATGTAGCCAGGGATGTAATTGTTGTTCTTGGATTGGCTGCTGGTGCTGCTTACCTCAACAGCTGGCTTGTTTGGCCTCTTTATTGGGCTGCTCAGGGGACCATGTTCTGGGCACTTTTTGTTCTTGGCCATGATTGTGGCCATGGAAGCTTTTCAAACAATCACAAACTAAACAGTGTTGTTGGACACCTGCTACATTCTTCAATTCTAGTTCCTTATCATGGGTGGAGAATCAGTCACAGGACTCATCATCAAAATCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGTTATCTGAGAAAATCTTTAGGAGCCTTGACACCATGACTCGGACTTTAAGATTTACTGTTCCTTTTCCACTGCTTGCATATCCTGTGTACCTTTTTAGTAGGAGTCCAGGGAAGACTGGTTCTCACTTCCATCCTGATAGTGACTTGTTTGTTCCAAGTGAAAGAAACGATGTTATCACATCTACAGCTTGTTGGTCTGCAATGGTAGCAATTCTTGTAGGATTGGGTTTTCTAATGGGTCCAATTCCATTGCTTAAGCTTTATGGGGTACCTTATCTTATCTTTGTTATGTGGTTGGATCTTGTTACATACTTGCATCATCATGGCCATGAAGACAAACTACCGTGGTATCGCGGAAAGGAATGGAGCTATCTCAGGGGCGGTCTTACCACTCTTGATCGCGACTATGGTTGGATTAACAACATCCACCATGACATTGGAACCCATGTCATTCATCACCTTTTCCCTCAGATCCCACACTATCACTTAATCGAAGCCACTGAGGCAGCGAAACCAGTGCTTGGAAAATATTACAAGGAACCAAAGAAATCTGCTCTGCTTCCATTTCACCTCATTGGAGACTTAGTGAGAAGTTTAAGGAGAGATAATTATGTCAGTGACACTGGTGAAGTTGTTTACTACCAAACAGACTCTGATCTCACTGATTGA 1368 0.4218 MATWVLSECGLKPLPPTFPRPKTGIVNSNSNPSKVRFLSTKNNGVSFSDPKFQSRRSFTSSSFRDRNFGLRVSAPLRVSPIEEEEVKKDVKINGGGVENEVGEFDPGAPPPFNLADIRAAIPKHCWVKDPWKSMSYVARDVIVVLGLAAGAAYLNSWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFRSLDTMTRTLRFTVPFPLLAYPVYLFSRSPGKTGSHFHPDSDLFVPSERNDVITSTACWSAMVAILVGLGFLMGPIPLLKLYGVPYLIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYKEPKKSALLPFHLIGDLVRSLRRDNYVSDTGEVVYYQTDSDLTD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1898 455 Pfam Fatty acid desaturase 156 411 IPR005804 GO:0006629
Ahy14g1898 455 Pfam Domain of unknown function (DUF3474) 1 149 IPR021863 GO:0016717
Ahy14g1898 455 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 54 453 - -
Ahy14g1898 455 CDD Delta12-FADS-like 128 396 - -
Ahy14g1898 455 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 54 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1898 Ahy-Chr14 108697478 108700664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1898 1 453 Lipid Metabolism Gene Families AT3G11170 69.298 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1898 K10257 - gmx:100305351 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1898 14 108697478 108700664 Ahy14g1898 14 108697478 108700664 ECH
Ahy14g1898 14 108697478 108700664 Ahy17g1493 17 28109951 28113373 ECH
Ahy14g1898 14 108697478 108700664 Ahy4g1679 4 99808226 99811429 hybridization