Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3383 ATGTCACGAATCTTCTCGAGATGGAAGAAGGTGAAGGAAGTGGCGTCACTCTCCGACACCCATTTGGTCGATTCTCCGGTTAACATGACCCGAATTCGGAACCGAACCGGTTTGAATTACCGGTTCAACCGTGTGCGCCCAATCTCGACCCATCTGAATCACCATATCCACATCACTGGCGGGGTCGGACATCATCGCCGGCGGGAGGCACTCGTCGGAGTTCAGGAGCGGTACAAATGGGACCGGGGTGGATCCGATGACAACCCGATCCGGAAGATTCGGGCAGAGGCAAACTGCCCGCGTTGCAGCAAGGACATGAACCTCGTATTCTCCAATCGCCATTTTCCGACCACATCAGCTTCTGATTCTGATTCAGGTTCTGGTTCGAGTTTGGCGCTACATGTTCCTGTGAATGGTGGTGGAGAAGCTGGTAGTGCTGGTTACCAAGCGGTGAATCTGTGTCCAACTTGCAAAACCGCTTATTACTTTAAACCTTTCAGCACTTCACCATTGCAAGGTACCTTTGTGGAGATTGGGAGGGTAACTAATAGTGGCAGCAATGGCAATGGCAATGGCAGTGGCAAATCTCAATCTTCTAGGAGGATCACACATGGGAAGAATGGTGGTGGTGGTAAAGAGGGTGGTGGAAATAGTAGTGGTCATGGTGGTGGTGATGGTGAAGATTATGGTTCTAAGAATGGTGGTGGTGGTAGCTGGCTTGAGGCTTCATTGTGGGACACTTTAAGGTCCTACAATGGTGGCGGTAATAGCGGGGAGCCACCTGAGGTATGGCCTCCACCACCAGGTGGTAACAATGTGAATGGTTTGGCTGTTCATAATCCTCCAGGGCCGCCTTTCGTGCATGGGATGAATATGCGTGCTCCGGGGTCCCGGGAAGGTGGCTCTGGCGGTAGAGGTGGAGGTGGCGGAAATGAAGAGAAGACTTCTTGGGGAGGGTCTAATTTGGGTAAGGATTTGCCATCCCCAAAGGAGATTTGTAAGGGACTTGACAAGTTTGTAATTGGACAAGAGAGAGCTAAGAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATATACCATTCCACTTTGCAGAAAGGGTCAGGGGCAGATCCTGGAGTTTCAGAGGGGTTAGATGATGACGATAATGTTGAGCTAGAAAAAAGTAATGTTCTTCTCATGGGTCCAACAGGATCAGGGAAGACGCTACTCGCGAAAACACTAGCTAGATTTGTGAATGTTCCGTTTGTCATTGCTGATGCAACAACCTTAACACAGGCTGGTTATGTTGGAGAAGATGTTGAATCAATACTGTACAAACTACTTGCGGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATCAGCCGGGATGTTTCTGGTGAGGGTGTTCAGCAGGCATTATTAAAAATGCTTGAAGGAACTATAGTAAATGTTCCTGAGAAAGGGGCTAGGAAGCATCCGCGGGGTGATAACATACAGATGGACACAAAGAATATTCTTTTCATTTGTGGCGGAGCATTTATTGATCTTGAAAAGACCATTTCAGAGAGACGTCAAGATTCTTCTATTGGTTTCGGAGCCCCAGTTCGTGCTAACATGAGAGCTGGTGGAATAATTGATGCTGTGCTAACATCATCTTTACTTGAGTCGGTGGAGAGTTCCGATCTTATTGCATATGGTCTCATACCAGAGTTTATTGGACGATTTCCCATCTTAGTGAGCTTGACAGCTTTAACTGAAGAGCAACTTATGATGGTCCTATCAGAACCAAAGAATGCTCTTGGAAAGCAGTACAAGAAATTATTCAGCATGAATGACGTAAAGCTACATTTCACAGATAAAGCTCTCAGACTGATTGCACAGAAAGCAATGGCCAAAAATACCGGTGCCAGAGGTTTAAGAGCCCTACTCGAAAGTATTTTAACCGACACAATGTTTGAGGTTCCAGAGCTTAAGACCGGAGATGATCGAATCGATGCAGTAGTTGTTGATGAAGAGTCAGTAGGATCAATAAACACCCCTGGATGTGGAGGAAAAATTCTTCGTGGAGACAATGCTTTGGAGAAATACCTCGCTAAGACGAAGGATTCACAGGAAAATGTTAACTTAGCTGAATCAGACTCACAAGATGGAGATTCAGAGCTTTCATCAAGGGCCATGAGCTTGTAA 2235 0.4617 MSRIFSRWKKVKEVASLSDTHLVDSPVNMTRIRNRTGLNYRFNRVRPISTHLNHHIHITGGVGHHRRREALVGVQERYKWDRGGSDDNPIRKIRAEANCPRCSKDMNLVFSNRHFPTTSASDSDSGSGSSLALHVPVNGGGEAGSAGYQAVNLCPTCKTAYYFKPFSTSPLQGTFVEIGRVTNSGSNGNGNGSGKSQSSRRITHGKNGGGGKEGGGNSSGHGGGDGEDYGSKNGGGGSWLEASLWDTLRSYNGGGNSGEPPEVWPPPPGGNNVNGLAVHNPPGPPFVHGMNMRAPGSREGGSGGRGGGGGNEEKTSWGGSNLGKDLPSPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHSTLQKGSGADPGVSEGLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGIIDAVLTSSLLESVESSDLIAYGLIPEFIGRFPILVSLTALTEEQLMMVLSEPKNALGKQYKKLFSMNDVKLHFTDKALRLIAQKAMAKNTGARGLRALLESILTDTMFEVPELKTGDDRIDAVVVDEESVGSINTPGCGGKILRGDNALEKYLAKTKDSQENVNLAESDSQDGDSELSSRAMSL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3383 744 MobiDBLite consensus disorder prediction 720 744 - -
Ahy15g3383 744 CDD AAA 390 501 - -
Ahy15g3383 744 MobiDBLite consensus disorder prediction 250 328 - -
Ahy15g3383 744 Pfam AAA domain (Cdc48 subfamily) 389 593 IPR003959 GO:0005524|GO:0016887
Ahy15g3383 744 Gene3D - 599 699 - -
Ahy15g3383 744 MobiDBLite consensus disorder prediction 182 235 - -
Ahy15g3383 744 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 49 743 - -
Ahy15g3383 744 SMART AAA_5 389 585 IPR003593 -
Ahy15g3383 744 Pfam C-terminal, D2-small domain, of ClpB protein 600 671 IPR019489 -
Ahy15g3383 744 SMART ClpB_D2_small_2 600 693 IPR019489 -
Ahy15g3383 744 TIGRFAM clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 322 691 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Ahy15g3383 744 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 49 743 - -
Ahy15g3383 744 Gene3D - 320 598 IPR027417 -
Ahy15g3383 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 683 IPR027417 -
Ahy15g3383 744 MobiDBLite consensus disorder prediction 182 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3383 Ahy-Chr15 156325412 156331018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3383 393 492 Miscellaneous Gene Families AT3G02450 37.624 8.43e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3383 K03544 - gmx:100805340 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3383 15 156325412 156331018 Ahy5g1904 5 87275077 87280593 hybridization
Ahy15g3383 15 156325412 156331018 Ahy19g1916 19 110713218 110719626 PCT
Ahy15g3383 15 156325412 156331018 Ahy9g1555 9 83927255 83932821 PCT
Ahy19g1916 19 110713218 110719626 Ahy15g3383 15 156325412 156331018 PCT
Ahy9g1555 9 83927255 83932821 Ahy15g3383 15 156325412 156331018 PCT