Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2782 ATGTATCCAAAGGGAAACAAGGTGGATTACTTGTCAATTTATTTAGATGCTGGTACTTTGCCTGATGTAGAGACCAGATTTTCCAAGTTTAAGTTGGTTCTAATTAATCAGGTCAATGACAAATTGACACAGATAAAAGAAACTCAACACACATTCAATGCCAGAGAGAGTGACTGGGGCTTCACATCGTTTATACCTTTAGCTGACCTTTATATTTATAACAAGGGATTTATTGTGAATGACACTTGTATAAGTGAAGCTAGGATTTCCATTAGCCGCCCAGAACTTGAGAAAAAGGTTGATGAAGCTGCTCCACCAGTTTCTGTGCAAGTTCCTGCTAAGCCTATTGAACATGCTGATAATCCTTTACCTATGGACATGTCTGCAATCCCAATTGATGAGCTTGTTGATTTCAGGGGTTTAGGGAAAATAGAAAAAGCGTTTGTTCCTCTTCTAGATGAAGTATGTGCAAAGCATCCCTCAGTTATTGGATGCCAGAAGAAGAGAAGTCGAAGGTTTAGCGAATGGGCATTCACGGCTTTGGGAAGAGTTCTGCATTTCCTCAAGACTAAAAAGGCGAGAGATATGGATGAAGAGGCTTGTAGCCATCTTCAAATCTTATGGGAGGAACTCGAGACGTGTAGATTCAATTTAACTTGGCTGGAGCCACATGTTCAATCTGCCTTAGGTATGAAAAATTACATGGAAAGATCCGATAAGGTGAAAAGTGTGAAGGAGAATGTGGCTGCTCTGGAGATGGAAATGAAGAAGCTGAAGGCAATGGTTGCTTCCGTAGAAGTTGATCTTGAAATGGCAAGAAGAGAATTGGTGAAAGTTGAAGAAGGCTTTGAAGAGATAGATTTGGATGGTGAAGTAGGATATGGACCATAG 891 0.404 MYPKGNKVDYLSIYLDAGTLPDVETRFSKFKLVLINQVNDKLTQIKETQHTFNARESDWGFTSFIPLADLYIYNKGFIVNDTCISEARISISRPELEKKVDEAAPPVSVQVPAKPIEHADNPLPMDMSAIPIDELVDFRGLGKIEKAFVPLLDEVCAKHPSVIGCQKKRSRRFSEWAFTALGRVLHFLKTKKARDMDEEACSHLQILWEELETCRFNLTWLEPHVQSALGMKNYMERSDKVKSVKENVAALEMEMKKLKAMVASVEVDLEMARRELVKVEEGFEEIDLDGEVGYGP* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2782 296 ProSiteProfiles MATH/TRAF domain profile. 1 89 IPR002083 GO:0005515
Ahy12g2782 296 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 280 - -
Ahy12g2782 296 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 102 IPR008974 GO:0005515
Ahy12g2782 296 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 280 - -
Ahy12g2782 296 SUPERFAMILY TRAF domain-like 1 91 - -
Ahy12g2782 296 CDD MATH 2 89 IPR002083 GO:0005515
Ahy12g2782 296 Pfam MATH domain 10 91 IPR002083 GO:0005515
Ahy12g2782 296 Coils Coil 241 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2782 Ahy-Chr12 117428710 117430535 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2782 - - ahf:112729469 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2782 12 117428710 117430535 Ahy12g2782 12 117428710 117430535 ECH
Ahy12g2782 12 117428710 117430535 Ahy17g0691 17 7236283 7248711 ECH
Ahy12g2782 12 117428710 117430535 Ahy2g2357 2 99697383 99699756 hybridization
Ahy12g2782 12 117428710 117430535 Ahy16g3358 16 150509195 150511872 PCT
Ahy12g2782 12 117428710 117430535 Ahy6g0801 6 10051276 10054488 PCT