Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3358 ATGAGTATTAGTTTTGAGACATTCACGTGGAAAATCCAAAACTTCTCTAAACAGAACACCAAGAATCTACAATCCAAGGCTTTCCGTATAGGACATCATAAATGGAGGATCCGTTTGTATCCATTAAGGAGGGACGTTAACCATTTCTCGTTGTATTTGATGGTTGCGGATTCTCTACCGGCTTATGGTTGGAGCAGAACCACATATTTCAAGTTGGTTGTTACAAATCAGGTTGATGCCAACAAGTCAATTGTAAAGGAGACTCAGCAGAAGTTCAATGGAGGAAATCGCAGTTGGGGCTCAACATTCCTTACCCTGAGTGACTTCTATGATCCTAACCAAGGGTATCTAGTCAATAACACATGTATCATTGAAGCTCATGTTTGTGTCTCCGATGTTCCGCCTCATGCTATCAAATTAAGAAAAACCAGTAGTAGCATTAGTCCAGCAAGTGACTCTATCTCTATCTTGCTTGATGATCAAGAAACAGAATCAACAGATGGGAGCGAGACACTTACTTCCGCGACCTGCAGGTCTAGTCGAACCGAAGATGAAGATGAATGTTCAGATTTAACACTAAAGGACATCATAAATTTGGACAGTTTGGGTAAAGAAGAAGCATCTTTTTTTCCATTGGTGGAAGATGCCTGCATGTGGCATCCTGATCTAATACAGAGCCAGAGGAACCGAAGCGAACGATTCAAAATATGGGCATTCACATCTTTAGGCCAAGTTCTGCATTTCCTCAAGACAAGCAAGGTGAAGGACATGGATGAAGATGGATGTAATTATCTGAAAGGTTTATGGGAGGAGCTTGTTAGGTCCTCAGGATTCAACTTAACTTGGTTGGAGCCTTATGTTCAATCTGCACTGGGAATGAAGTCTCATTTGGAAAGAGCAGCGGGTATGGATGATTTAAGGGACAATGTGGTTGCCATTGAGATCAAGATGAAGAATCTGAGGGGAGAACTTGCTGCTGCAGAAGCTGAGTTTGTGGAAGCAAGGAAAGCTTTGGCTGAGGCAAGAAAAGGTTACAAAGAGATAGATATGAATGATGTGTTAGGCTATTCCATGTTTTAG 1080 0.4167 MSISFETFTWKIQNFSKQNTKNLQSKAFRIGHHKWRIRLYPLRRDVNHFSLYLMVADSLPAYGWSRTTYFKLVVTNQVDANKSIVKETQQKFNGGNRSWGSTFLTLSDFYDPNQGYLVNNTCIIEAHVCVSDVPPHAIKLRKTSSSISPASDSISILLDDQETESTDGSETLTSATCRSSRTEDEDECSDLTLKDIINLDSLGKEEASFFPLVEDACMWHPDLIQSQRNRSERFKIWAFTSLGQVLHFLKTSKVKDMDEDGCNYLKGLWEELVRSSGFNLTWLEPYVQSALGMKSHLERAAGMDDLRDNVVAIEIKMKNLRGELAAAEAEFVEARKALAEARKGYKEIDMNDVLGYSMF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3358 359 Pfam MATH domain 12 129 IPR002083 GO:0005515
Ahy16g3358 359 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 4 147 IPR008974 GO:0005515
Ahy16g3358 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 339 - -
Ahy16g3358 359 SUPERFAMILY TRAF domain-like 7 132 - -
Ahy16g3358 359 Coils Coil 303 344 - -
Ahy16g3358 359 MobiDBLite consensus disorder prediction 160 181 - -
Ahy16g3358 359 SMART math_3 7 109 IPR002083 GO:0005515
Ahy16g3358 359 ProSiteProfiles MATH/TRAF domain profile. 5 128 IPR002083 GO:0005515
Ahy16g3358 359 CDD MATH 7 128 IPR002083 GO:0005515
Ahy16g3358 359 MobiDBLite consensus disorder prediction 160 178 - -
Ahy16g3358 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3358 Ahy-Chr16 150509195 150511872 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3358 - - adu:107492716 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3358 16 150509195 150511872 Ahy6g0801 6 10051276 10054488 hybridization
Ahy12g2782 12 117428710 117430535 Ahy16g3358 16 150509195 150511872 PCT
Ahy2g2357 2 99697383 99699756 Ahy16g3358 16 150509195 150511872 PCT