Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0801 ATGGAGAATTATCAGCAAGGAAAGGAGATTGAGAAGTTCACATGGGTAATTGAAAATTTCTCAAAGAAGAACACCAAGAAGCTACGATCCAAGTCCTTCCAAGTTGGTGGTTGTAAATGGCAGATACATGTGCATCGAATAGAAAAAGCAAAAGGTATGGAGTATTTATCATTGTATTTGAAGGTTGGAGGTTCTGTACCATCATTTGGATGGAGCAAATATGCATATTTCAGTTTAGCTCTAATTAATCATATGGATCCCCAAAAGTCAGTTGTAAGAGAGACACAACAGAAGTTCAATGCTGGATACCGTAGCTGGGGTTCAAGCTTTGTGGCTCTGAATGACTTCTATGATCCTAAACAAGGATATCTCCTCAACAATGTTTGCATCATTGAAGTCCGAATCTCTGTCTCCGATGTTGCATTTGACACCAACATTTTTAACATCAATAATAATAATAATGTCTCATCATCTACTCATCACTCTAACAATCAAACTTCAAATGAGACACTGAGCCGTTCAACTTCCACCACAACCCAAGAAGATGATGTTAATGGAATAACAACATTACAACCTAATTCAGATGATGTAGTACACTATGTGCCTACAGCACCACCTCTATTATATCCTACTATTATATGTGATGATGAACCTTTAGTAGTGCCCTTAAACACTACTACTCTTAGTGAGATTCTAGATGTGAAAAGCTTAGGAGAAGAAGAAAAAGCTTATGTTCCCTTGTTGGAAGAGGTATGTTCATGGCACCCTTCGCTGATCCAAAGCCAAATGAGAAAGAGTCCGAAATTCATTCAATGGGCATTCATAGCATTAGGTCAAGTCCTACATTTCCTCAAGACAACAAAGGCAAAGGACATGGACGAGAATGCATTCAACAAACTCCAATGTCTTTGGGAGGAGCTTCAGTTGTTCGGATTCGAGCTGAGTTGGTTGGAGCCGCATGTTGAATCTGCATTGGACATGAAAGGCTACTTGGAAAGAGTGAAGACCCTAAAGGAGAATGTGATTGGTTTGGAGATTGAGATGAAGATGCTCCGAGCCAAAATGGCTGTGGCAGAAATCGATCTTGAGTCGGCAAAGAGAGACTTGGAAATGGCAGAGGTACAAATGGGATTTGAAGAAAAGGACATGGATAAGGAACTGGGATATGGTTATGGATATGGTTATGTCATATCTTAA 1197 0.396 MENYQQGKEIEKFTWVIENFSKKNTKKLRSKSFQVGGCKWQIHVHRIEKAKGMEYLSLYLKVGGSVPSFGWSKYAYFSLALINHMDPQKSVVRETQQKFNAGYRSWGSSFVALNDFYDPKQGYLLNNVCIIEVRISVSDVAFDTNIFNINNNNNVSSSTHHSNNQTSNETLSRSTSTTTQEDDVNGITTLQPNSDDVVHYVPTAPPLLYPTIICDDEPLVVPLNTTTLSEILDVKSLGEEEKAYVPLLEEVCSWHPSLIQSQMRKSPKFIQWAFIALGQVLHFLKTTKAKDMDENAFNKLQCLWEELQLFGFELSWLEPHVESALDMKGYLERVKTLKENVIGLEIEMKMLRAKMAVAEIDLESAKRDLEMAEVQMGFEEKDMDKELGYGYGYGYVIS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0801 398 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 374 - -
Ahy6g0801 398 Pfam MATH domain 17 137 IPR002083 GO:0005515
Ahy6g0801 398 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 145 IPR008974 GO:0005515
Ahy6g0801 398 ProSiteProfiles MATH/TRAF domain profile. 10 135 IPR002083 GO:0005515
Ahy6g0801 398 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 374 - -
Ahy6g0801 398 SUPERFAMILY TRAF domain-like 12 140 - -
Ahy6g0801 398 MobiDBLite consensus disorder prediction 153 187 - -
Ahy6g0801 398 SMART math_3 12 116 IPR002083 GO:0005515
Ahy6g0801 398 Coils Coil 327 382 - -
Ahy6g0801 398 CDD MATH 12 135 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0801 Ahy-Chr6 10051276 10054488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0801 - - ahf:112695910 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3358 16 150509195 150511872 Ahy6g0801 6 10051276 10054488 hybridization
Ahy12g2782 12 117428710 117430535 Ahy6g0801 6 10051276 10054488 PCT
Ahy2g2357 2 99697383 99699756 Ahy6g0801 6 10051276 10054488 PCT