Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0691 ATGACCGTGATGACTCCCGCTCCCATTGACCAGCAGGACGACGAGGAGATGCTTGTTCCGCACACTGATTTGGCTGAGAACAATCACCAACCTATGGAAGTTGTAGCTCAACCTGAAGCTGCCAACACTGTGGAGAGTCAGCCTGTTGAGGACCCTCAATCATCGAGATTCACCTGGAAAATTCCTGAATTTTCTAGGATGAATACAAAAAAGCTCTATTCAGATGTATTTATTGTTGGTGGTTATAAATGGCGTGTGCTCATCTTCCCTAAAGGAAACAACGTGGACTATTTGTCCATGTATTTGGATGTTGCAGATTCATCTAATTTGCCGTATGGTTGGAGTAGATATGCACAATTTAGCTTGGCAGTTATCAATCAAGTCCATAATAAGTACTCTGTGAGAAAAGACACGCAGCACCAATTCAATGCACGAGAAAGTGATTGGGGTTTCACGTCCTTCATGCCACTTGGTGAATTGTATGATGCCAGTAGAGGCTATCTTGTGAATGATACTCTTGTAGTTGAAGCTGAGGTTCTTGTTCGTAGAATCGTTGATTATTGGACTTACGATTCAAAGAAAGAGACAGGTTATGTTGGGCTTAAGAACCAGGGAGCCACATGTTATATGAATTCTCTTCTCCAAACACTCTACCATATTCCTTACTTTCGAAAGGCAGTGTACCATATGCCAACAACAGAAAATGATATGCCGTCTGGAAGCATCCCTTTGGCTCTGCAGAGTCTATTCTACAAGCTCCAGTATAGTGATACCAGTGTGGCAACAAAGGAACTGACAAAATCTTTTGGATGGGATACCTATGATTCTTTCATGCAGCATGATGTTCAAGAACTAAATAGAGTCCTTTGTGAAAAACTTGAAGACAAAATGAAGGGAACTGTTGTGGAGGGAACTATCCAGAAGTTATTCGAAGGGCATCATATGAACTATATTGAGTGCATCAACGTGGACTATAAATCAACTAGAAAGGAGTCATTTTATGACCTTCAGCTTGATGTCAAGGGCTGTCGTGACGTTTATGCTTCCTTTGATAAGTATGTTGAAGTTGAACCTCTTGAGGGTGACAACAAATACCATGCTGAACAATTTGGTTTGCAGGATGCTAAGAAGGGTGTCCTATTTATTGATTTCCCTCCTGTTCTTCAGCTTCAGCTGAAAAGATTTGAATATGACTTTATGAGGGACACTATGGTAAAGATTAATGACCGTTATGAGTTTCCTTTGCAACTTGACCTTGATCGTGAGGATGGGAAGTATTTATCACCTGAGGCTGATAGGACAGTTCGCAATCTTTACACACTCCACAGTGTTTTGGTTCACAGTGGTGGTGTGCATGGCGGACATTATTATGCGTTTATAAGGCCAACTCTGTCTGAGCAATGGTACAAATTTGATGATGAGAGAGTGACAAAAGAAGATACTAAGCGGGCATTAGAGGAGCAATATGGTGGTGAGGAGGAGTTACCTCAGACAAATCCTGGATTCAATAATACTCCGTTCAAATTCACCAAATATTCAAATGCTTACATGCTGGTGTACATACGTGAATCTGACAAGGACAAAATAATATGCAATGTTGATGAGAAAGACATTGCTGAACATTTAAGGGAGAGGTTGAAGAAAGAGCAGGAGGAAAAAGAACACAAAAAAAAAGAAAAGGCTGAGGCCCACCTTTATACTATTATAAAGGTGGCACGGGATGAAGATCTTTCTGAGCAGATTGGAAAGGACATATATTTTGATCTTGTAGACCATGACAAAGTTAGGAGTTTCCGTGTCCAAAAGCAGTTGTCTTTTAACACATTTAAGGAAGAGGTCGCTAAAGAGTTTGGTATACCAGTTCAATTTCAGCGATTTTGGCTATGGGCGAAGCGACAGAACCATACCTATCGTCCTAACCGGCCATTGACACACATTGAGGAAGCACAGTCTGTTGGACAATTGAGAGAGGTGTCAAACAAGGTTCACAATGCAGAATTAAAATTATTTTTGGAAGTGGAGCTTGGACCGGATTTACGTCCCATTGCACCACCTGAAAAGACAAAGGATGATATATTACTTTTCTTCAAGTTATATGATCCTGAAAAAGAGGAGCTACGTTATGTTGGAAGGTTATTTGTGAAGAGTACTGGCAAGCCATCAGAAATCTTAACAAAGTTGAATGAAATGGCTGGTTATGATCCTGATGAAGATATTGGACTTTATGAGGAAATCAAGTTTGAACCAAATGTCATGTGTGAGCCTATTGATAAGAAATTAACATTTCGAGCAAGCCAGCTAGAAGATGGAGATATTGTATGCTTTCAAAAAGGTCCTGTAACTGTAATGGATAGCGAGGATCATATCCGCTATCCAGATGTGCCTTCGTACTTGGAATATGTGCACAACCGCCAGGTTGTTCATTTTCGATCTCTTGATAAACCTAAAGAAGATGACTTCTGCCTGGAGATGTCAAGGCTTTATACATATGATGATGTGGTGGAAAAAGTTGCTCAACAGCTTGGTTTGGAAGATCCATCCAAGATTAGGCTTACTCCACACAACTGCTACTCTCAGCAACCAAAACCCCAACCCATTAAGTATAGAGGAGTTGAACATTTGTCTGACATGCTGGTACACTACAACCAGACGTCAGATATATTGTACTATGAAGTACTTGACATCCCTCTGCCGGAATTACAAGGTTTGAAAACTCTGAAAGTTGCATTTCACCATGCAACCAAGGATGAAGTCGTTATTCATACCATCAGACTTCCAAAGCAGAGCACTGTGGGGGATGTCCTCGATGACCTCAAAACTAAGGTGGAACTGTCTCATCCTAATGCTGAGCTTAGGTTGCTTGAAGTCTTCTATCACAAGATATACAAGGTCTTCCCTCCCAATGAAAAGATTGAAAACATCAATGACCAATATTGGACATTACGAGCCGAGGAGATTCCAGAAGAAGAGAAAAATCTTGGTCCTCATGACCGCCTAATTCATGTCTATCATTTTACAAAAGACACAGCTCAGAATCAAATGCAAATTCAGAACTTTGGAGAACCTTTTTTCTTGGTCATTCATGAAGGTGAGACTTTGACTGAAATTAAAGACAGAATAAAAAAGAAACTTCAAGTTCCTGATGATGAGTTTGCAAAGTGGAAGTTTGCATTTTTCTCATTAGGGCGTCCTGAGTATCTTCAAGACTCTGACATTGTATCCAGTCGTTTTCAGAGAAGAGATGTTTATGGTGCATGGGAGCAGTATCTTGGATTGGAGCATACTGACAATGCTCCTAAAAGAGCATATGCAGTTAACCAGAATCGCCACACGTTTGAGAAGCCAGTAAAGATCTACAATTAG 3363 0.4056 MTVMTPAPIDQQDDEEMLVPHTDLAENNHQPMEVVAQPEAANTVESQPVEDPQSSRFTWKIPEFSRMNTKKLYSDVFIVGGYKWRVLIFPKGNNVDYLSMYLDVADSSNLPYGWSRYAQFSLAVINQVHNKYSVRKDTQHQFNARESDWGFTSFMPLGELYDASRGYLVNDTLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVEPLEGDNKYHAEQFGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLSEQIGKDIYFDLVDHDKVRSFRVQKQLSFNTFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTHIEEAQSVGQLREVSNKVHNAELKLFLEVELGPDLRPIAPPEKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTKLNEMAGYDPDEDIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIVCFQKGPVTVMDSEDHIRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLGLEDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVIHEGETLTEIKDRIKKKLQVPDDEFAKWKFAFFSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRAYAVNQNRHTFEKPVKIYN* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0691 1120 CDD MATH 56 179 IPR002083 GO:0005515
Ahy17g0691 1120 Pfam Ubiquitin carboxyl-terminal hydrolase 199 520 IPR001394 GO:0004843|GO:0016579
Ahy17g0691 1120 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN 4 1045 - -
Ahy17g0691 1120 Gene3D Cysteine proteinases 196 524 - -
Ahy17g0691 1120 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 199 523 IPR028889 -
Ahy17g0691 1120 Pfam ICP0-binding domain of Ubiquitin-specific protease 7 624 878 IPR024729 -
Ahy17g0691 1120 Gene3D - 684 803 - -
Ahy17g0691 1120 SUPERFAMILY TRAF domain-like 52 184 - -
Ahy17g0691 1120 ProSiteProfiles MATH/TRAF domain profile. 54 179 IPR002083 GO:0005515
Ahy17g0691 1120 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 439 456 IPR018200 GO:0004843|GO:0006511
Ahy17g0691 1120 CDD peptidase_C19C 197 525 - -
Ahy17g0691 1120 Pfam MATH domain 61 180 IPR002083 GO:0005515
Ahy17g0691 1120 Pfam Ubiquitin-specific protease C-terminal 888 1098 IPR029346 -
Ahy17g0691 1120 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 200 215 IPR018200 GO:0004843|GO:0006511
Ahy17g0691 1120 Coils Coil 532 563 - -
Ahy17g0691 1120 SMART math_3 56 160 IPR002083 GO:0005515
Ahy17g0691 1120 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 1045 - -
Ahy17g0691 1120 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 52 195 IPR008974 GO:0005515
Ahy17g0691 1120 SUPERFAMILY Cysteine proteinases 194 551 IPR038765 -
Ahy17g0691 1120 Gene3D - 804 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0691 Ahy-Chr17 7236283 7248711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0691 199 488 Miscellaneous Gene Families AT2G24640 24.290 1.65e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0691 K11838 - gmx:100800328 2143.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0691 17 7236283 7248711 Ahy17g0691 17 7236283 7248711 ECH
Ahy16g3357 16 150503794 150507173 Ahy17g0691 17 7236283 7248711 ECH
Ahy12g2782 12 117428710 117430535 Ahy17g0691 17 7236283 7248711 ECH
Ahy17g0691 17 7236283 7248711 Ahy7g0540 7 5416574 5429078 hybridization