Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1585 ATGAGCTTTCATATGTTATTTTCTGGCATAAGGAACGCCTTTAGGAAGGATGAACTAGGCCTGGAAATAATGCATATATCACTGCCTACCACTCTTGCTTTGGCTGCAGATCCTATTGCTTCTCTGATTGATACTGCATTCATCGGACACATAGGCCCTGTGGAGCTTGCTGCAGTGGGGGTATCAATTGCAATTTTTAATCAAATCTCAAAAATAGCAATAATTCCTCTGGTCAGTGTTACAACCTCGTTGGTTGCCGAGGAAGATGCCGTCGAGAAATTACAAAATCAACCATCAGAAACAGAAATGCTGATCCATGCCTCTTCTGTGACTGAGGAAACAAAATTGGAAGTGGAACAAATAGATCCTGAGTGCAGTACATCATCAAGAAATGTTAATAGAGTAGCTAAACTTGGCCATGACAAAAGCTATATTCCATCAGCTTCATCAGCAATAGTTATTGGAGCTGTTCTCGGCATCTTACAAGCTCTCTTTCTCATTTTTACAGCCAGACCAATCTTGAATTACATGGGAGTCGATTATAATTCTCCAATGTTGAAGCCGGCACAGCAATACTTGACTCTGAGGTCATTTGGTGCACCAGCTGTGATACTTTCTATGGCCATGCAAGGAGTTTTTCGAGGAATCAAAGATACGAAAACACCTTTATACGCCACAATTGTGGGAGATGTAACAAATATCATTTTAGATCCATTGCTTATCTTCGTACTCCGGTTGGGAGTCAGCGGTGCAGCAATCGCACACATTATCTCCCAGTACTTGATTTCCTTGGTGTTGTTGTGGAGTTTAATGAAGCAAGTTGATCTAATGCCTCCAAGTATCCAAGATTTTCAATTTGGGAAGATTCTAAAAAATGGGTTTCTGCTATTGTTGAAAGTTACAGCAGTGACATTCTGTGTGACACTGTCAGCATCCCTTGCAGCAAGACAAGGATCAATAACCATGGCTGCCTTCCAAATCTGCTTACAGATTTGGATGGCCACCTCTTTGCTTGCTGATGGATTAGCTGTTTCTGCTCAACTTGGGCTGATTCTGGGGCTGGTTCTCTCATTCCTTCTCTTTAGTCTGCTCCCTTTTGCTTCTAAGTTATTTACAAACGACGTCGCTGTTCTGCATCTTATTGGTATTGGTATTCCGTATGTTGCAGCCACTCAACCCCTCAATTCACTAGCATTTGTTTTTGACGGAGTAAACTACGGAGCTTCGGATTTCATATACTCTGCTTACTCAATGATTTTGGTGGCATTGGTGAGCATATTTAGCTTATATATGTTATCCTCAAGCTATGGCTTTAGTGGTATCTGGATTGCTTTGTCTATTTACATGAGCCTCAGGACATTTGCTGGCTTTTGGAGGATAGGTACTAGATCAGGACCTTGGCACTTCCTGAAGGAAAACTATGCACTACTACAATAG 1437 0.4161 MSFHMLFSGIRNAFRKDELGLEIMHISLPTTLALAADPIASLIDTAFIGHIGPVELAAVGVSIAIFNQISKIAIIPLVSVTTSLVAEEDAVEKLQNQPSETEMLIHASSVTEETKLEVEQIDPECSTSSRNVNRVAKLGHDKSYIPSASSAIVIGAVLGILQALFLIFTARPILNYMGVDYNSPMLKPAQQYLTLRSFGAPAVILSMAMQGVFRGIKDTKTPLYATIVGDVTNIILDPLLIFVLRLGVSGAAIAHIISQYLISLVLLWSLMKQVDLMPPSIQDFQFGKILKNGFLLLLKVTAVTFCVTLSASLAARQGSITMAAFQICLQIWMATSLLADGLAVSAQLGLILGLVLSFLLFSLLPFASKLFTNDVAVLHLIGIGIPYVAATQPLNSLAFVFDGVNYGASDFIYSAYSMILVALVSIFSLYMLSSSYGFSGIWIALSIYMSLRTFAGFWRIGTRSGPWHFLKENYALLQ* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1585 478 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 347 471 IPR044644 -
Ahy12g1585 478 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 4 347 IPR044644 -
Ahy12g1585 478 TIGRFAM matE: MATE efflux family protein 29 347 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy12g1585 478 Pfam MatE 148 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy12g1585 478 CDD MATE_DinF_like 22 462 IPR044644 -
Ahy12g1585 478 PANTHER PROTEIN DETOXIFICATION 347 471 - -
Ahy12g1585 478 PANTHER PROTEIN DETOXIFICATION 4 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1585 Ahy-Chr12 85558130 85565823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1585 K03327 - gmx:100810327 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1585 12 85558130 85565823 Ahy12g1585 12 85558130 85565823 ECH
Ahy12g1585 12 85558130 85565823 Ahy18g0351 18 3044329 3048877 ECH
Ahy12g1585 12 85558130 85565823 Ahy13g0540 13 5601551 5605504 ECH
Ahy12g1585 12 85558130 85565823 Ahy2g1345 2 70422834 70430045 hybridization