Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0351 ATGGCTGAGAAGCAGAAACCGTCTTCCTCAACATCATCAGGGGATTGGAGGAGAATACCACTTTGCACTTTCTTTAAGGATACCAGACAAGTTTTCAAATTAGATAGTCTTGGTCGTGAAATATTGTCTATTGCACTGCCTGCAGCAATGGCTTTGACAGCAGACCCCATAGCTTCACTGGTTGACACAGCATTCATAGGCCGAATCGGTGCAGTGGAGCTTGCTGCTGTAGGAGTTTCAATAGCTCTCTTCAATCAAGTGTCAAGGATTGCAATATTCCCCCTTGTCAGTTGCACAACCTCTTTTGTGGCTGAGGAAGACAGCATCACCGGAGCAAGTCCTCCGGTAGATGAAAGCGAAACCATGGAAGCAGGTCCACCCTCTGATGCTGAAACCAAAGAGTTCCTACCCCAGAAAGGTACCATTGTTGGAAGTATTCAGAAACTAGATTTGGCTGGTGAAAGCTTTGACACAGTTGAGGAGGCGCAACAAAAGAAAAGGCATATCCCTTCGGCTTCATCTGCAATATTTATCGGCGGCATCCTTGGCCTCATCCAGGCAGTACTACTTATATCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTAGCTTCTGACTCTCCTATGCTACACCCTGCGCAACGGTACCTGACACTGCGGTCCCTTGGTGCTCCTGCGGTTCTTCTTTCGTTGGCGATGCAGGGAGTCTTCAGAGGATTTAAGGACACTAGAACTCCTCTATATGCTACTGTGGCTGGAGATGTTACCAATATAGCATTAGATCCTTTATTCATGTTTGTATTTCGCTTAGGCGTCAGCGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTTATTTCAGTTATACTTCTATGGAGGTTGATGGAACAAGTTGATCTTATTCCTCCAAGCATCAAGCATTTGAGATTTGACCGATTTCTTAGAAATGGTTTCCTATTGTTAATGAGAGTCATTGCTGTAACATTCTGTGTGACACTGGCCGCGTCTTTAGCTGCGCGCCACGGATCAACATCCATGGCAGCTTTTCAAGTGTGCCTACAGATTTGGCTGGCAGTGTCTCTTCTGGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCGGGTGCATTTGCTAATAAGGACTATGAGAAGGCCACAACAACTGCTTCGCGAGTATTGCAGATGGGATTGGTTCTAGGTGTGGGACTTGCATTTATTCTTGGAACAGGATTGCACTTTGGAGCTAAGCTGTTTACTGAAGATGTTAAAGTCCTCCATCTCATTAGAATGGGGATACCGTTTGTAGCATTAACACAACCCCTGAACTCATTGGCATTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTCGCATATTCAGCCTTCTCTATGATTGTGGTGGCCATCATTAGCATAGTATGTTTACTTATCATGTCATCTGCTGGTGGTTTCATTGGAATATGGATTGCTTTGACAATTTATATGTCTCTTAGGGCCTTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGGAATTCCTATGGAGATGA 1563 0.4517 MAEKQKPSSSTSSGDWRRIPLCTFFKDTRQVFKLDSLGREILSIALPAAMALTADPIASLVDTAFIGRIGAVELAAVGVSIALFNQVSRIAIFPLVSCTTSFVAEEDSITGASPPVDESETMEAGPPSDAETKEFLPQKGTIVGSIQKLDLAGESFDTVEEAQQKKRHIPSASSAIFIGGILGLIQAVLLISAAKPLLNFMGVASDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLMEQVDLIPPSIKHLRFDRFLRNGFLLLMRVIAVTFCVTLAASLAARHGSTSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFANKDYEKATTTASRVLQMGLVLGVGLAFILGTGLHFGAKLFTEDVKVLHLIRMGIPFVALTQPLNSLAFVFDGVNFGASDFAYSAFSMIVVAIISIVCLLIMSSAGGFIGIWIALTIYMSLRAFAGFLRIGTGSGPWEFLWR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0351 520 Pfam MatE 322 475 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy18g0351 520 Pfam MatE 166 263 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy18g0351 520 CDD MATE_DinF_like 37 510 IPR044644 -
Ahy18g0351 520 PANTHER PROTEIN DETOXIFICATION 43 127 518 - -
Ahy18g0351 520 PANTHER PROTEIN DETOXIFICATION 43 15 119 - -
Ahy18g0351 520 TIGRFAM matE: MATE efflux family protein 47 490 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy18g0351 520 MobiDBLite consensus disorder prediction 109 133 - -
Ahy18g0351 520 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 127 518 IPR044644 -
Ahy18g0351 520 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 15 119 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0351 Ahy-Chr18 3044329 3048877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0351 K03327 - gmx:100780165 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0351 18 3044329 3048877 Ahy18g0351 18 3044329 3048877 ECH
Ahy18g0351 18 3044329 3048877 Ahy13g0540 13 5601551 5605504 ECH
Ahy12g1585 12 85558130 85565823 Ahy18g0351 18 3044329 3048877 ECH
Ahy18g0351 18 3044329 3048877 Ahy8g1156 8 26927018 26931539 hybridization
Ahy18g0351 18 3044329 3048877 Ahy13g0540 13 5601551 5605504 PCT
Ahy13g0540 13 5601551 5605504 Ahy18g0351 18 3044329 3048877 PCT