Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1345 ATGAGCTTTCATATGTTATTTTCTGGCATAAGGAACGCCTTTAGGAAGGATGAACTAGGCCTGGAAATAATGCATATATCACTGCCTACCACTCTTGCTTTGGCTGCAGATCCTATTGCTTCTCTGATTGATACTGCATTCATCGGACACATAGGCCCTGTGGAGCTTGCTGCAGTGGGGGTATCAATTGCAATTTTTAATCAAATCTCAAAAATAGCAATAATTCCTCTGGTCAGTGTTACAACCTCGTTGGTTGCCGAGGAAGATGCCGTCGATAAATTACAAAATCAACCATCAGAAACAGAAATGCTGATCCATACCTCTTCTGTGACCGAGGAAACAAAATTGGAAGTGGAACAAATAGATCCTGAATGCAGTACATCATCAAGAAGTGTTAATAGAGTAGCTAAACTTGGCCATGACAAAAGCTATATTCCATCAGCTTCATCAGCAATAGTTATCGGTGCCATTCTCGGCGTCTTACAAGCTCTCTCTCTCATTTTTACAGCCAGACCAATCTTGAATTACATGGGAGTTGATTATAATTCTCCGATGTTGAAGCCGGCACAGCAATACTTGACTCTGAGGTCATTTGGTGCACCAGCTGTGATACTTTCTATGGCCATGCAAGGAGTTTTTCGAGGAATCAAAGATACGAAAACACCTTTATATGCTACAATTGTGGGAGATGTAACAAATATCATTTTAGATCCATTGCTTATCTTCGTACTCCGGTTGGGAGTCAGCGGTGCAGCAATCGCACACATTATCTCCCAGTACTTGATTTCCTTGGTGTTGTTGTGGAGTTTAATGAAGCAAGTTGATCTAATGCCTCCAAGTATCCAAGATTTTCAATTTGGGAAGATTCTAAAAAATGGGTTTCTGCTATTGTTGAAAGTTACAGCAGTGACATTCTGTGTGACACTGTCAGCATCCCTTGCAGCAAGACAAGGATCAATAACCATGGCCGCCTTCCAAATCTGCTTACAGATTTGGATGGCGACCTCTTTGCTTGCTGATGGATTAGCTGTTTCTGCTCAAGCTATTCTTGCAAGTGCATTTGCGCAAAGGGATTACCATAAAGTGATCACATCGGCTTCGCGTGTTCTTCAGCTTGGGCTGATTCTGGGGCTGGTTCTCTCATTCCTTCTCTTTAGTCTGCTCCCTTTTGCTTCTAAGTTATTTACAAACGACGTCGCTGTTCTGCATCTTATTGGTATTGGTATTCCGTATGTTGCAGCCACTCAACCCCTCAATTCACTAGCATTTGTTTTTGACGGAGTAAACTACGGAGCTTCGGATTTCATATACTCTGCTTACTCAATGATTTTGGTGGCATTGGTGAGCATATTTAGCTTATATATGTTATCCTCAAGCTATGGCTTTAGTGGTATCTGGATTGCTTTGTCTATTTACATGAGCCTCAGGACATTTGCTGGCTTTTGGAGGATAGGTACTAGATCAGGACCTTGGCATTTCCTGAAGGAAAACTATGCACTACTGCAATAG 1509 0.4188 MSFHMLFSGIRNAFRKDELGLEIMHISLPTTLALAADPIASLIDTAFIGHIGPVELAAVGVSIAIFNQISKIAIIPLVSVTTSLVAEEDAVDKLQNQPSETEMLIHTSSVTEETKLEVEQIDPECSTSSRSVNRVAKLGHDKSYIPSASSAIVIGAILGVLQALSLIFTARPILNYMGVDYNSPMLKPAQQYLTLRSFGAPAVILSMAMQGVFRGIKDTKTPLYATIVGDVTNIILDPLLIFVLRLGVSGAAIAHIISQYLISLVLLWSLMKQVDLMPPSIQDFQFGKILKNGFLLLLKVTAVTFCVTLSASLAARQGSITMAAFQICLQIWMATSLLADGLAVSAQAILASAFAQRDYHKVITSASRVLQLGLILGLVLSFLLFSLLPFASKLFTNDVAVLHLIGIGIPYVAATQPLNSLAFVFDGVNYGASDFIYSAYSMILVALVSIFSLYMLSSSYGFSGIWIALSIYMSLRTFAGFWRIGTRSGPWHFLKENYALLQ* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1345 502 Pfam MatE 148 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1345 502 Pfam MatE 298 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1345 502 CDD MATE_DinF_like 22 486 IPR044644 -
Ahy2g1345 502 TIGRFAM matE: MATE efflux family protein 29 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1345 502 PANTHER PROTEIN DETOXIFICATION 4 495 - -
Ahy2g1345 502 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 4 495 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1345 Ahy-Chr2 70422834 70430045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1345 K03327 - gmx:100810327 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1585 12 85558130 85565823 Ahy2g1345 2 70422834 70430045 hybridization