Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0717 ATGCAGATGTACAATTCTATCAATGCAATACATCTAAATATGATCATGCATCTCTGTCCCAATTTCCAGCCAAAGTTGGTCGTTGATAATATTATGTGGTTTTCTTTTCCAGCTGAGATCGAGGCATCTGGTGGACAAGCTCTTACATTTGGGGGAGATATTTCCAATGAAGCTCACGTGGAATCCATGATTAAAGCTGCAACCGATGCTTGGGGAACTGTTGATGTATTGATAAACAATGCAGGAACTACTAGAGATGGTTTGTTAATGAGAATGAAGAAATCTCAATGGCAGGAGGTTATTGATCTAAATCTCACAGGGGTTTTTCTTTGCACACAGGCTGCAGCTAAGATTATGATGAAGAAGAAGAAGGGAAGGATAATCAATATTGCATCAGTTGTTGGTCTGGTTGGCAATGTTGGACAAGCCAATTATAGTGCTGCAAAAGCCGGAGTAATTGGCTTAACAAAAACTGTTGCAAAGGAGTATTCTAGCAGAAGCATCACTGTTAATGCAGTTGCCCCAGGGTTTATTGCATCTGATATGACTGCAAAGCTAGGAGAAGACATTGAGAAAAAGATTTTGGAGACAATCCCATTAGGGCGATATGGTCAACCAGAAGAAGTTGCTGGGCTGGTGGAATTTTTGGCTCTTAATCCTGCTGCTAGTTACATCACTGGGCAGGTGTTCACCATTGATGGAGGTATGGTGATGTAA 717 0.4114 MQMYNSINAIHLNMIMHLCPNFQPKLVVDNIMWFSFPAEIEASGGQALTFGGDISNEAHVESMIKAATDAWGTVDVLINNAGTTRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNVGQANYSAAKAGVIGLTKTVAKEYSSRSITVNAVAPGFIASDMTAKLGEDIEKKILETIPLGRYGQPEEVAGLVEFLALNPAASYITGQVFTIDGGMVM* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0717 238 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4 38 238 - -
Ahy10g0717 238 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 132 160 IPR020904 GO:0016491
Ahy10g0717 238 Pfam Enoyl-(Acyl carrier protein) reductase 39 236 - -
Ahy10g0717 238 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 38 238 - -
Ahy10g0717 238 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 238 IPR036291 -
Ahy10g0717 238 PRINTS Glucose/ribitol dehydrogenase family signature 199 219 IPR002347 -
Ahy10g0717 238 PRINTS Glucose/ribitol dehydrogenase family signature 119 135 IPR002347 -
Ahy10g0717 238 PRINTS Glucose/ribitol dehydrogenase family signature 145 164 IPR002347 -
Ahy10g0717 238 PRINTS Glucose/ribitol dehydrogenase family signature 166 183 IPR002347 -
Ahy10g0717 238 PRINTS Glucose/ribitol dehydrogenase family signature 72 83 IPR002347 -
Ahy10g0717 238 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 IPR002347 -
Ahy10g0717 238 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 IPR002347 -
Ahy10g0717 238 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 IPR002347 -
Ahy10g0717 238 Gene3D - 28 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0717 Ahy-Chr10 8134187 8136424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0717 39 238 Acyl Lipid Metabolism Gene Families AT1G24360 74.000 2.83e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0717 K00059 - gmx:100809809 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0998 20 14592857 14596385 Ahy10g0717 10 8134187 8136424 hybridization
Ahy10g0717 10 8134187 8136424 Ahy13g4454 13 144664126 144666981 PCT
Ahy10g0717 10 8134187 8136424 Ahy3g4172 3 141669313 141672070 PCT
Ahy13g4454 13 144664126 144666981 Ahy10g0717 10 8134187 8136424 PCT
Ahy3g4172 3 141669313 141672070 Ahy10g0717 10 8134187 8136424 PCT