Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0079 ATGTTGAGGAAAGGCATAGCTAAAAGCAAACTCTCCGTTGACTTCAACTTGAACCTGTTGCTCAAACGCGGCAAGCTCGCGGCAACAAAGGCCATCGTGACGCTCCACGGCCTCCACCGCTCCGCCCAAAACGACGACGCCGTTTACGCGCCGCGAGACTACGAGTTCAGCTGTAGCAACAGCCCCGCCTTCTTCCACGTCATCAAACGCAGCAGCAAGCAGCGCTGCAGCACCAGGTTCCCCCACTACGACGTCGACGTTCAGAAAGTGCTTGAGATACTCAACAACAATAACAATAACAATAACAAGTTCGAGGCTTCTTCTCCGTTACCCGGGTTTGGGAAGAGTCCAATTGGGAAAAAACTTATCAGAATCACTGACTCACCATTCCCTTTGAAGAACGAAGAAGAAGCTGCTGGGGACAACCAAGTTGACGTGGCAGCTGAGGAGTTTATCAAGCGCTTCTATAAGGACCTCAACTTGCAGAAGAACATTGACTCACCCTACCATTATAACTTCTGGGATAGATGA 531 0.5028 MLRKGIAKSKLSVDFNLNLLLKRGKLAATKAIVTLHGLHRSAQNDDAVYAPRDYEFSCSNSPAFFHVIKRSSKQRCSTRFPHYDVDVQKVLEILNNNNNNNNKFEASSPLPGFGKSPIGKKLIRITDSPFPLKNEEEAAGDNQVDVAAEEFIKRFYKDLNLQKNIDSPYHYNFWDR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0079 176 Pfam Cotton fibre expressed protein 141 163 IPR008480 -
Aed7g0079 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 176 - -
Aed7g0079 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0079 Aed-Chr7 539304 539834 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0079 - - gmx:100783043 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0079 7 539304 539834 Aed2g0225 2 1482842 1483396 ECH
Aed7g0079 7 539304 539834 Aed1g1411 1 12973931 12974515 ECH
Aed7g0079 7 539304 539834 Aed7g0079 7 539304 539834 ECH
Aed5g2466 5 25905496 25906077 Aed7g0079 7 539304 539834 PCT