Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0225 ATGGAAAACAATACACCAGTAATAGCAAAGAGAGTGTGGAACTTAATACGTGTGGCCTTCTTCATGTTGAGAAAGGGCATATCAAAGGGTAAAATAATGATGCACCTCAGCAACACCATGCTGAAACGCCCCGGCAAGCTCGCCGGAAAAGCCATCGCCAACCTCATTTTCCACCACAACCACGGTGTCTCCGGCGCCGCCAACAACCTCCAATTCTCCGCCGCCAGGGAGTACGAGTTCAGCTGCAGCAACACTCCCAACAACTTCTTTGCCACCGCCATCAAGCGCCACCACCGCCACAACCCCTTCTTCACGTGCGCTCACGCGCCACCCACCCTCGACGACAACGCCATGACGGTTAATGGCGTGTTGGAGATGCTGAGCAATGAGGCCGCAGTGGAGGCGTCGCCGGCCCCTATGGTGAGGCATTTGATCAGGGTGACGGACTCTCCGTTCCCACTTGGTGAATCCGAGGATGACAAGGACAACCAAGTGGACAAGGCCGCGGAAGAGTTCATAAAGAGGTTCTACAAAGACTTGAAGAAGCAGACTTGA 555 0.5423 MENNTPVIAKRVWNLIRVAFFMLRKGISKGKIMMHLSNTMLKRPGKLAGKAIANLIFHHNHGVSGAANNLQFSAAREYEFSCSNTPNNFFATAIKRHHRHNPFFTCAHAPPTLDDNAMTVNGVLEMLSNEAAVEASPAPMVRHLIRVTDSPFPLGESEDDKDNQVDKAAEEFIKRFYKDLKKQT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0225 184 Pfam Cotton fibre expressed protein 162 183 IPR008480 -
Aed2g0225 184 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 183 - -
Aed2g0225 184 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0225 Aed-Chr2 1482842 1483396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0225 - - gmx:100801941 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0225 2 1482842 1483396 Aed1g1411 1 12973931 12974515 ECH
Aed5g2466 5 25905496 25906077 Aed2g0225 2 1482842 1483396 ECH
Aed7g0079 7 539304 539834 Aed2g0225 2 1482842 1483396 ECH
Aed2g0225 2 1482842 1483396 Aed2g0225 2 1482842 1483396 ECH
Aed1g1411 1 12973931 12974515 Aed2g0225 2 1482842 1483396 PCT