Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0074 ATGGAAAGCACACTTAAGACCCTTAGAGATGGTGAGTCAGTGCTTGATCTGAGTCCAAGATCCACCGTGAGTGGCGGTGTTGAGGATGTCTACGGTGAAGATCATGCTACTGAGGACCAACTTGTCACCCCATGGAGTTTCTCAGTTGCCAGTGGGTACTCTTTGCTTAGAGATCCACAGTACAACAAGGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCACACTATTTGCGTGGACTACTACCTCCTACAATTACCTCCCAGCAACTTCAGGAGAAGCAGTTGATAAACAATATCCGACAGTATCAGGAGACGAATGAAAGGCTATTTTACAAACTTCTAATTGATAATGTTGAGGAACTGCTCCCAATTGTGTATACTCCTGTTGTTGGTGAGGCTTGCCAGAAATATGGGAGTATCTTCAAGCGTCCTCAGGGTCTTTACATAAGTTTGAAAGAGAAGGGGAAGATTCTTGAAGTGTTGAAAAACTGGCCTGAGAGAAGTATTCAAGTTATTGTTGTAACAGATGGTGAACGAATTTTGGGGCTAGGGGATCTTGGATGTCAGTGTTTGCCTATTACGATTGATGTGGGGACAAACAATGAGAAATTACTCAATGACGAGTTTTACATTGGGCTTAGACAAAAGAGAGCAACTGGGCAGGAATATTATGAACTCTTGCATGAGTTCATGACTGCTGTCAAGCAAAGCTATGGAGAGAAAGTTCTCGTTCAGGCAGGAACTGGAATAGCTGAACTAATAGCTCTTGAAATGTCAAAGCAGACAAAGACACCCATAGAGGAGACTCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTGATTGTTAATTCAAGAAAGGCTTCGCTTCAACACTTCAAGCAGCCTTGGGCTCATGAGCATGAGCCTGTTGGCAGTCTCTTAGAAGCTGTTAAGGTAATCAAGCCTACAGTTTTGATTGGATCATCAGGAGTGGGGAAAACATTTACAAAGGAAGTAATTGAGGCTGTGACTTCTATCAATGAAAAACCTCTTGTTTTGGCTCTCTCCAATCCAACTTCACAGTCTGAGTGTACAGCTGAAGAGGCTTACCAGTGGAGTGAGGGTCGTGCAATTTTTGCTAGTGGAAGTCCATTTGATCCTATAGAATACAAGGGCAAAGTGTACTATTCTGGCCAGGCCAACAATGCTTACATTTTCCCTGGCTTTGGTTTGGGGTTGGTCATGTCAGGAGCAATCCGAGTACATGATGATATGCTTCTGGCAGCTTCGGAAGCCTTGGCTAAACTAGTGACTGAGGAGAACTACGAAAAAGGGTTGCTTTATCCACCATTCTCTGACATCAGAAATATTTCAGCTAACGTAGCTGCAAATGTTGCTGCCAAGGCTTATGAGCTAGGCTTGGCTACACGTCTCCCTCGTCCTCAGAATCTTGTAAAGTATGCTGAGAGCTGCATGTATACCCCAGTCTACCGAAACTATAGGTGA 1488 0.4402 MESTLKTLRDGESVLDLSPRSTVSGGVEDVYGEDHATEDQLVTPWSFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTITSQQLQEKQLINNIRQYQETNERLFYKLLIDNVEELLPIVYTPVVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQCLPITIDVGTNNEKLLNDEFYIGLRQKRATGQEYYELLHEFMTAVKQSYGEKVLVQAGTGIAELIALEMSKQTKTPIEETRKKIWLVDSKGLIVNSRKASLQHFKQPWAHEHEPVGSLLEAVKVIKPTVLIGSSGVGKTFTKEVIEAVTSINEKPLVLALSNPTSQSECTAEEAYQWSEGRAIFASGSPFDPIEYKGKVYYSGQANNAYIFPGFGLGLVMSGAIRVHDDMLLAASEALAKLVTEENYEKGLLYPPFSDIRNISANVAANVAAKAYELGLATRLPRPQNLVKYAESCMYTPVYRNYR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0074 495 Gene3D - 190 243 IPR037062 GO:0004471
Aed7g0074 495 PANTHER MALIC ENZYME-RELATED 190 245 - -
Aed7g0074 495 PANTHER MALIC ENZYME-RELATED 245 495 - -
Aed7g0074 495 PANTHER MALIC ENZYME-RELATED 4 189 - -
Aed7g0074 495 CDD NAD_bind_1_malic_enz 240 489 - -
Aed7g0074 495 PANTHER MALIC ENZYME 190 245 - -
Aed7g0074 495 PANTHER MALIC ENZYME 4 189 - -
Aed7g0074 495 PIRSF ME 188 246 IPR001891 GO:0004470|GO:0004471
Aed7g0074 495 PIRSF ME 27 189 IPR001891 GO:0004470|GO:0004471
Aed7g0074 495 PIRSF ME 244 495 IPR001891 GO:0004470|GO:0004471
Aed7g0074 495 Pfam Malic enzyme, N-terminal domain 103 189 IPR012301 GO:0004471
Aed7g0074 495 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Aed7g0074 495 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Aed7g0074 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 245 494 IPR036291 -
Aed7g0074 495 Gene3D - 244 495 - -
Aed7g0074 495 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 245 IPR046346 -
Aed7g0074 495 SMART malic_2 103 254 IPR012301 GO:0004471
Aed7g0074 495 Gene3D - 50 189 IPR037062 GO:0004471
Aed7g0074 495 SMART Malic_M_2 230 464 IPR012302 GO:0051287
Aed7g0074 495 Pfam Malic enzyme, NAD binding domain 245 463 IPR012302 GO:0051287
Aed7g0074 495 PANTHER MALIC ENZYME 245 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0074 Aed-Chr7 491226 498060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0074 K00029 - gmx:100782096 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0074 7 491226 498060 Aed2g0230 2 1524408 1529610 ECH
Aed7g0074 7 491226 498060 Aed1g1409 1 12947587 12953973 ECH
Aed7g0074 7 491226 498060 Aed10g0060 10 412144 416971 ECH
Aed7g0074 7 491226 498060 Aed7g0074 7 491226 498060 ECH
Aed5g2465 5 25895765 25901311 Aed7g0074 7 491226 498060 PCT