Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0230 ATGGACGATGAGATAAATGGCGCGGTGTCCGACGCCGACGTTAACCCAACCCCCGGCGGCGGTGTTCGAGATGTCTACGGCGAGGACAAGGCCACTGAGGATCAGTTTGTGACTCCTTGGTGTATCTCTGTTGCTAGTGGATATACTTTGTTGAGAGATCCACACTACAACAAAGGACTCGGCTTCACTGAAAAAGAGAGGGACGCTCACTACTTGCGTGGCCTTCTTCCCCCTTCAGTGAAGAAAATGATCCAACATATACGCCAGTATGAAGTTCCATTGCACAAGTACAGGGCAATGATGGATCTTCAGGAGAGAAATGAAAAGCTGTTTTACAAGCTTCTACTTGATCATGTTGAGGAGTTACTCCCAGTTGTGTATACCCCAACTGTTGGTGAAGCTTGCCAAAAATATGGGAGCATCTTCGTCAATCCTCAGGGTCTTTATATAAGTTTGAATGAGAAAGGGAGGATTCTGGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGCGAATTCTGGGTCTTGGGGATCTAGGCTGTCAGGGGATGGGAATACCAGTAGGAAAACTTTCTTTATATTCAGCACTTGGCGGAGTTCGTCCTTCTAGTTGCTTGCCTATTACCATCGATGTGGGTACAAACAATGAGAAGTTGTTGGATGATGAATTATATATAGGGCTCAGGCATAAACGGGCAACTGGGAAGGAATATGCTGAATTTCTGCATGAATTTATGAATGCAGTCAAGCAAAATTATGGTGAAAGAATCCTCATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATAGGTCAACACATCTTGTCTTTAATGATGACATTCAGGCTGGCACTGGAATAGCAGGACTCATAGCACTTGAAACATCAAAACGGACAAATGTCCCAGTGGATGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTGAGTTCCCGTAAAGAATCACTTCAACATTTTAAGCAGCCATGGGCTCATGAACATGAACCTGTTAAGGAACTTGTAGATGCCATTAATGAAATTAAGCCAACAGTGTTAATTGGAACTTCAGGACAAGGGAGAACTTTTACTAAGGAAGTGATTGAAGCTATGGCTTCCATTAATGAGAAACCTATTATTCTTTCTCTTTCCAACCCAACATCACAGTCGGAATGCACTGCTGAAGAAGCTTATACTTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGGAGCCCATTTGATCCAGTCGAATACGATGGAAAAGTGTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGGACCATTCGAGTGCTTGATGACCTGCTTCTGGCAGCTTGCTTGGCCAGTCGCCTTCCTCAACCAAAAGATTTGGTGCAGTTTGCTGAGAGCTCTATGTATGCACCAGTCTATAGAGGCTACCGGTGA 1512 0.4392 MDDEINGAVSDADVNPTPGGGVRDVYGEDKATEDQFVTPWCISVASGYTLLRDPHYNKGLGFTEKERDAHYLRGLLPPSVKKMIQHIRQYEVPLHKYRAMMDLQERNEKLFYKLLLDHVEELLPVVYTPTVGEACQKYGSIFVNPQGLYISLNEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVRPSSCLPITIDVGTNNEKLLDDELYIGLRHKRATGKEYAEFLHEFMNAVKQNYGERILIQFEDFANHNAFDLLEKYRSTHLVFNDDIQAGTGIAGLIALETSKRTNVPVDEVRKNIWLVDSKGLIVSSRKESLQHFKQPWAHEHEPVKELVDAINEIKPTVLIGTSGQGRTFTKEVIEAMASINEKPIILSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRVLDDLLLAACLASRLPQPKDLVQFAESSMYAPVYRGYR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0230 503 PANTHER MALIC ENZYME 476 503 - -
Aed2g0230 503 SMART malic_2 104 285 IPR012301 GO:0004471
Aed2g0230 503 PANTHER MALIC ENZYME 297 474 - -
Aed2g0230 503 PANTHER MALIC ENZYME-RELATED 297 474 - -
Aed2g0230 503 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 26 294 IPR046346 -
Aed2g0230 503 PANTHER MALIC ENZYME 14 296 - -
Aed2g0230 503 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 PRINTS Malic enzyme signature 266 284 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 PRINTS Malic enzyme signature 291 307 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 Gene3D - 45 145 - -
Aed2g0230 503 Gene3D - 146 341 IPR037062 GO:0004471
Aed2g0230 503 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 296 499 IPR036291 -
Aed2g0230 503 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g0230 503 Pfam Malic enzyme, N-terminal domain 104 285 IPR012301 GO:0004471
Aed2g0230 503 PANTHER MALIC ENZYME-RELATED 14 296 - -
Aed2g0230 503 PANTHER MALIC ENZYME-RELATED 476 503 - -
Aed2g0230 503 Pfam Malic enzyme, NAD binding domain 295 495 IPR012302 GO:0051287
Aed2g0230 503 SMART Malic_M_2 276 494 IPR012302 GO:0051287
Aed2g0230 503 PIRSF ME 23 298 IPR001891 GO:0004470|GO:0004471
Aed2g0230 503 PIRSF ME 296 498 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0230 Aed-Chr2 1524408 1529610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0230 K00029 - gmx:100785718 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0230 2 1524408 1529610 Aed1g1409 1 12947587 12953973 ECH
Aed5g2465 5 25895765 25901311 Aed2g0230 2 1524408 1529610 ECH
Aed7g0074 7 491226 498060 Aed2g0230 2 1524408 1529610 ECH
Aed2g0230 2 1524408 1529610 Aed2g0230 2 1524408 1529610 ECH
Aed2g0230 2 1524408 1529610 Aed10g0060 10 412144 416971 ECH
Aed1g1409 1 12947587 12953973 Aed2g0230 2 1524408 1529610 PCT