Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2465 ATGGGACACGGCTGCTCAATAAACTTAGGATATATTACTTCCTGTTCAAAGAGAAAAAAGCAAAACTCATCAACCGAGGAAGAGAAGAAAGTAATTGGCAGGAACAGCAAAATGGAGAGCACACTCAAGTCCTTGAGAGATGGAGAGTCTGTCTTGGACCTCAGCCCAAGATCCACCGTCAGCGGCGGCGTTGAGGACATCTACGGTGAGGATCGCGCCACCGAGGACCAACTTGTCACCCCATGGACTTTCTCCGTTGCCAGTGGGTACTCTTTGCTAAGGGATCCGCAGTACAACAAAGGGCTAGCTTTCACTGAAAAAGAGAGGGATGAACACTATTTGCGTGGCCTCTTGCCTCCCACAGTCAGCACTCAGCAACTTCAGGAGAAGAAACTGATGACCAGCATCAGGCAATATCAGGTTCCCTTGCAAAAGTACGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTCATTGATAATGTTGAGGAATTGCTCCCAGTTGTATATACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGGAGCATATTCAGGCGTCCTCAGGGTCTTTACATTAGTTTGAAAGAGAAGGGTAAAATCCTTGAGGTTTTAAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGCGGATTTTGGGACTTGGAGATCTTGGATGTCAGTGTTTGCCTATTACTATCGACGTGGGGACAAATAATGAGAAATTATTGAATGATGAATTTTACATTGGGCTTAGGCAAAAGAGGGCAACTGGGAAGGAATATTATGACCTTCTGCATGAGTTTATGTCTGCTGTGAAGCAAAACTACGGGGAAAAAGTTCTTGTACAGTTTGAAGACTTTGCAAATCACAATGCTTTTGAGTTACTTTCTAAATATGGTACAACCCATCTTGTTTTCAATGACGATATACAGGGGACTGCATCTGTTGTTCTAGCTGGAGTTGTAGCATCCCTAAAGCTCATTGGTGGTACCTTGCCTGAACACACATTCCTCTTCCTTGGTGCTGGAGAAGCAGGAACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCAAAGCAGACTAAGGCACCCATAGAAGAGAGTCGCAAGAAGATATGGCTTGTAGATTCAAAGGGTTTAATTGTTAGTTCGCGGAAGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTTAACAGTCTCCTAGAGGCAGTCAAGGTGATCAAACCAACAGTTTTGATTGGATCATCAGGAGTGGGAAAAACATTTACAAAGGAAGTAGTTGAGACAATGACTTCAAACAATGATGTAAAACCTTGCCTCACTCTTGTTAAACCTCTCATTTTGGCTCTCTCCAATCCTACCTCACAGTCTGAGTGTACAGCTGAAGAGGCTTACCAGTGGAGTGAGGCCAACAATGCTTACATTTTCCCTGGCTTTGGTTTGGGTTTAGTAATCTCAGGAGCAATTCGAGTACATGACGATATGCTTCTAGCAGCTTCGGAATCCTTGGCTACACAAGTGAGCGAGGACAACTACAAAAATGGCTTGATTTATCCACCATTCTCTAATATCAGAAAAATTTCGGCCAATATAGCTGCAAAGGTTGCTGCCAAGGCATACGAACTTGGCTTGGCTACCCGTCTTCCCCGTCCTCAGAATCTTGTGAAGTATGCTGAGAGTTGCATGTATACCCCGGTATACCGCAACTATAGGTGA 1770 0.4418 MGHGCSINLGYITSCSKRKKQNSSTEEEKKVIGRNSKMESTLKSLRDGESVLDLSPRSTVSGGVEDIYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDEHYLRGLLPPTVSTQQLQEKKLMTSIRQYQVPLQKYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYYDLLHEFMSAVKQNYGEKVLVQFEDFANHNAFELLSKYGTTHLVFNDDIQGTASVVLAGVVASLKLIGGTLPEHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEESRKKIWLVDSKGLIVSSRKNSLQHFKKPWAHEHEPVNSLLEAVKVIKPTVLIGSSGVGKTFTKEVVETMTSNNDVKPCLTLVKPLILALSNPTSQSECTAEEAYQWSEANNAYIFPGFGLGLVISGAIRVHDDMLLAASESLATQVSEDNYKNGLIYPPFSNIRKISANIAAKVAAKAYELGLATRLPRPQNLVKYAESCMYTPVYRNYR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2465 589 Pfam Malic enzyme, N-terminal domain 153 239 IPR012301 GO:0004471
Aed5g2465 589 MobiDBLite consensus disorder prediction 18 40 - -
Aed5g2465 589 PANTHER MALIC ENZYME 32 239 - -
Aed5g2465 589 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 66 321 IPR046346 -
Aed5g2465 589 Gene3D - 239 319 IPR037062 GO:0004471
Aed5g2465 589 SMART Malic_M_2 322 558 IPR012302 GO:0051287
Aed5g2465 589 CDD NAD_bind_1_malic_enz 322 583 - -
Aed5g2465 589 PANTHER MALIC ENZYME 240 487 - -
Aed5g2465 589 PANTHER MALIC ENZYME 487 589 - -
Aed5g2465 589 SMART malic_2 153 312 IPR012301 GO:0004471
Aed5g2465 589 PANTHER MALIC ENZYME-RELATED 240 487 - -
Aed5g2465 589 PRINTS Malic enzyme signature 460 476 IPR001891 GO:0004470|GO:0004471
Aed5g2465 589 PRINTS Malic enzyme signature 219 248 IPR001891 GO:0004470|GO:0004471
Aed5g2465 589 PRINTS Malic enzyme signature 159 183 IPR001891 GO:0004470|GO:0004471
Aed5g2465 589 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 322 588 IPR036291 -
Aed5g2465 589 Gene3D - 320 589 - -
Aed5g2465 589 Gene3D - 87 238 IPR037062 GO:0004471
Aed5g2465 589 PIRSF ME 238 589 IPR001891 GO:0004470|GO:0004471
Aed5g2465 589 PIRSF ME 23 240 IPR001891 GO:0004470|GO:0004471
Aed5g2465 589 Pfam Malic enzyme, NAD binding domain 322 487 IPR012302 GO:0051287
Aed5g2465 589 MobiDBLite consensus disorder prediction 20 40 - -
Aed5g2465 589 ProSitePatterns Malic enzymes signature. 318 334 IPR015884 GO:0004471
Aed5g2465 589 PANTHER MALIC ENZYME-RELATED 32 239 - -
Aed5g2465 589 PANTHER MALIC ENZYME-RELATED 487 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2465 Aed-Chr5 25895765 25901311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2465 K00029 - gmx:100782096 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2465 5 25895765 25901311 Aed2g0230 2 1524408 1529610 ECH
Aed5g2465 5 25895765 25901311 Aed1g1409 1 12947587 12953973 ECH
Aed5g2465 5 25895765 25901311 Aed10g0060 10 412144 416971 ECH
Aed5g2465 5 25895765 25901311 Aed5g2465 5 25895765 25901311 ECH
Aed5g2465 5 25895765 25901311 Aed7g0074 7 491226 498060 PCT