Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02103 ATGAGGACTGGAAGCTGCGCCGTCCAGCAGGGTCTCACCACCGAAGCTGCAGCCGTCGTCAAGCAAGCTGTGACGCTCGCCAAGCGTCGCGGCCACGCCCAAGTCACTCCCCTCCACGTGGCCAACACTATGCTCGCCTCCGCTAACGGCCTCCTCCGCACGGCTTGCCTTCAATCCCATTCCCATCCTCTTCAGTGCAAGGCCCTGGAGCTTTGCTTCAATGTCGCCCTCAACCGCCTTCCTGCCTCCAACACCGCCGGCGCCATGTTGGGCCCCACCTCTGCTCACTACTCTTATTGTCCTTCCATCTCCAACGCCCTTGTCGCTGCCTTCAAGCGAGCCCAGGCCCACCAGCGCCGTGGATCCATCGAGAATCAGCAGCAACCGCTGTTAGCCGTCAAGATAGAGCTGGAACAACTCATCATTTCCATTTTGGACGATCCTAGTGTCAGCCGTGTCATGAGAGAAGCTGGGTTTTCCAGTACTCAAGTCAAAAGTAATATCGAGCAAACCGTGTCTTTGGAAATATGTTCTAAGAAGGAACATAACACTACCGCCGCCAAAACATCCGGAGATCCGGTCAGGTCCGAGGATGTGTCCAGTGTGATAGATAGTTTGATGAATCAGAAATGGAGAAGTACGGTGGTGGTGGGAGAGTGTGAGGCTAGTCTTGAAGGTGTAGTACGAGGAGTGATGGATAAGGTTGAAAAGGACGATGTTGATGATGAGAGTTTGAGAGGGGTCAAGTTTGTTTCTCTTACTCCTTCTGCTTTTGGTCATTTGTCCCAAGTAGAGGTAGAGAACAAGATTGAAGAGCTTAAGAGCATTATTACGAACAATCGTCTTGCCAAAGGGTTTATCTTGTATATGGGAGATCTTAAGTGGCTGTTTGAATACAGAAGTGGAGGTGGGAGGGGTAGTTATTATTGCCCTGTGGAGCACATAATAATGGAAGTGGGTAAGATGGTGAGAGGTGTAACGTCTCAATGCCTCGCTCTCAAGAATACTACCGGAAGGTTGAGGTTGATAGGAATAGCTACTTTTCAGACTTATATGAAATGTAAAAATGGGAATCCATCGCTGGAGACTCTCTGGGGACTTCATCCTCTTACTATTCCTGCAGGAAGCTTGCACTTAAGTCTCATCACTGACACTGACAGTGGCCTACAAAATCAGTCCTCTAACAAGAAAGCCGAGGGTAATCAAACTGGCTGGCTGTTACGGGAACCAGTGGAAGAGAAGCAAGTTCGAAGCTTGCAGAGCAGTAACTGTACCAGTGACTCATCCACAAATCTTCCTGCATGGCTCCAACAGTACAAACATGATAGTAGAGCATCCACCAATGATCAGAACTGTGTTCCAGTGGGAGACCTTTGTAAAAAGTGGAATTCTATGTGCCACAGGCCAGTTCAAAAACAACCCTATCATGGTGAAAAAACCTTCACATTCTCCTCTGTATCACCTTCTTCGTCTCCTTCAGGCTTGTCATATAACCCACCAAGAGACCAGCCTTTCTGGATCTCTGAAAGTGGAAATAATATAAACAAGCCAAGCGAACCAACTCTGAGAATGTATATCCCAGAGCATAACAGCGCCAAGCAGTCATCCCCACCGTCCAATCCCAGTTCAAACCCTAATTCCACATCATCTAGTGATCTCATCATGGAAACAGAATATGTGAGCAAGTTCAGAGAGCTCAATTCAGAGAATTTGAAAACCCTATGCAATGCCTTGGAGAAAAAAGTCCCGTGGCAGAAACATATAGTACCAGACATAGTAAGCACCGTTTTACAGTGCCGTTCTGGCATGTTAAGAAGAAAAGGGAACATCAGAAACAGCGAGGCCAAGGAAGAAACGTGGTTGTTCTTCCAAGGATTTGATGCGGAAGCTAAAGAGAAAATGGCCAGAGAACTGGCCACGCAAGTATTTGGATCCCGCAGCAATAACCTCGTTTCAATAGCTTTGAGCAGTTTTTCATCAACGGGGGCACAGGAAATTTGCAGAAACAAAAGATCAAGAGACGAACAAAGTTATTATGTGGAGAGATTTGGGGATGCAATTTGTGGAAATCCTCACAGGGTGTTTGTGGTGGAGGACATAGACCAAGCGGATTATTGTTCTCAATTGGGTTTCAAAAGGGCCATTGAAAGAGGAAGGATAGTGGATTCAAATGGCAAAGAGGTTAGTCTTTGTGATGCAATAATCATTTTCAGCTGTGAAAGTTTCAGCTCCAGATCAAGAGCGGGCTCCCCTCCAGTTAAGGAAAAGTTGTTATCTGGAGAGAAAGATGATAATATTGCTACTATGGAGGAGACGAGCCCTTGTGTGTCTTTGGATTTGAACATTTCTATTGATGATGACTGTGATGAGGGTCGGCTAGTGGATTACACTGGGCTTCTTGAATCCGTAGATAGACGGATTGTCTTCAACATTCAGGAATTATGA 2445 0.4671 MRTGSCAVQQGLTTEAAAVVKQAVTLAKRRGHAQVTPLHVANTMLASANGLLRTACLQSHSHPLQCKALELCFNVALNRLPASNTAGAMLGPTSAHYSYCPSISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNIEQTVSLEICSKKEHNTTAAKTSGDPVRSEDVSSVIDSLMNQKWRSTVVVGECEASLEGVVRGVMDKVEKDDVDDESLRGVKFVSLTPSAFGHLSQVEVENKIEELKSIITNNRLAKGFILYMGDLKWLFEYRSGGGRGSYYCPVEHIIMEVGKMVRGVTSQCLALKNTTGRLRLIGIATFQTYMKCKNGNPSLETLWGLHPLTIPAGSLHLSLITDTDSGLQNQSSNKKAEGNQTGWLLREPVEEKQVRSLQSSNCTSDSSTNLPAWLQQYKHDSRASTNDQNCVPVGDLCKKWNSMCHRPVQKQPYHGEKTFTFSSVSPSSSPSGLSYNPPRDQPFWISESGNNINKPSEPTLRMYIPEHNSAKQSSPPSNPSSNPNSTSSSDLIMETEYVSKFRELNSENLKTLCNALEKKVPWQKHIVPDIVSTVLQCRSGMLRRKGNIRNSEAKEETWLFFQGFDAEAKEKMARELATQVFGSRSNNLVSIALSSFSSTGAQEICRNKRSRDEQSYYVERFGDAICGNPHRVFVVEDIDQADYCSQLGFKRAIERGRIVDSNGKEVSLCDAIIIFSCESFSSRSRAGSPPVKEKLLSGEKDDNIATMEETSPCVSLDLNISIDDDCDEGRLVDYTGLLESVDRRIVFNIQEL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02103 814 Pfam Clp amino terminal domain, pathogenicity island component 23 47 IPR004176 -
Accr5g02103 814 Pfam Clp amino terminal domain, pathogenicity island component 135 170 IPR004176 -
Accr5g02103 814 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
Accr5g02103 814 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Accr5g02103 814 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 810 - -
Accr5g02103 814 MobiDBLite consensus disorder prediction 483 519 - -
Accr5g02103 814 MobiDBLite consensus disorder prediction 483 551 - -
Accr5g02103 814 MobiDBLite consensus disorder prediction 528 551 - -
Accr5g02103 814 Gene3D - 9 173 IPR036628 -
Accr5g02103 814 Gene3D - 553 773 IPR027417 -
Accr5g02103 814 Gene3D - 181 366 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02103 Accr-Chr5 47378055 47381228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02103 - - pcin:129304875 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02103 5 47378055 47381228 Accr3g01398 3 15844103 15850025 ECH
Accr5g02103 5 47378055 47381228 Accr5g02103 5 47378055 47381228 ECH
Accr5g02103 5 47378055 47381228 Accr4g01508 4 15332585 15337331 ECH
Accr5g02103 5 47378055 47381228 Accr3g02144 3 38257096 38261459 ECH