Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0988 ATGAGGACAGGAAGCTGCGCCGTCCAGCAGGGTCTCAACGCCGAAGCTGCAGCCGTCGTCAAGCAAGCCGTGACGCTCGCCAGGCGTCGCGGCCACGCCCAAGTCACTCCCCTCCACGTGGCCAACACCATGCTCGCCTCCGCTAACGGCCTCCTCCGCACGGCTTGCCTTCAATCCCATTCCCATCCTCTTCAGTGCAAGGCCCTGGAGCTTTGCTTCAATGTCGCCCTCAACCGCCTTCCCGCCTCCAACACCGCCGGCGCCATGTTGGGCCCCACCGCCGCTCACTACTCTTATTGTCCTTCCATCTCCAACGCCCTTGTCGCCGCCTTCAAGCGAGCCCAGGCCCACCAGCGCCGTGGATCCATCGAGAATCAGCAGCAGCCGCTGTTAGCCGTCAAGATAGAGCTGGAACAACTCATCATTTCCATTTTGGACGATCCTAGTGTCAGCCGTGTCATGAGAGAAGCTGGGTTCTCCAGTACTCAAGTCAAAAGTAATATCGAGCAAACCGTGTCTTTGGAAATATCTTCTCAGAAGGAACAGAACACTACCGCCGCCAAAACATCCGGAGATCCGGTCAGGTCCGAGGATGTGTCGAGTGTGATAGATAGTTTGATGAATCAGAAACGGAGAAGTACGGTGGTGGTGGGAGAGTGTGAGGCTAGTCTTGAAGGTGTAGTACGAGGAGTGATGGATAAGGTTGAAAAGGACGATGTTGATGATGTGAGTTTGAGAGGGGTCAAGTTTGTTTCTCTAACTCGTTCTGCTTTTGGTCATTTGTCCCAAGTAGAGGTAGAGAAAAAGATTGAAGAACTTAAGAACATTATTACGAACAGTAGTCTTGGCAAAGGGTTTATTTTGTATATGGGAGATCTTAAGTGGCTGTTTGAATACAGAAGTGGAGGTGGGAGGGCTAGTTACTATTGCCCATTGGAGCACATAATAATGGAAGTGGGAAAGCTGGTGGCAGGTGTAACATCTCAACGTCTGGTTCTTGAGAATAATACAGGAAGGTTGAGGTTGATAGGAATAGCTACTTTTCAGACTTATATGAAATGTAAAAATGGGGATCCATCGCTGGAGACTATCTGGGGACTTCATCCTCTTACTATTCCTGCAGGAAGCTTGCACTTGAGTCTCATCACTGACACTGACAGTGGCCTACAAAATCAGTCCTCTAACAAGAAAGCCGAGGGCGATCGAATTGGCTGGCTGTTACCGGAAACAGTGGATGAGAAGCAAGTTCGAAGTTTGCAGAGCAGTAACTGTAACAGTGACTCATCCACAAATCTTCCTGCATGGCTCCAACAGTACAAACTTGAGAGTAGAGCATCCTCCAATGATCAGAACTGTGTTCCAGTGGGAGACCTTTGTAAAAAGTGGAACTCTATGTGCAATAGGCCAGCTCAAAAACAACCCTACCATGGTGAAAAAACCTTCACATTCTCCTGTGTATCACCTTCGTCTCCTTCAGGCTTGTCATATAACCCACCAAGAGACCAGCCTTTCTGGATCTCTGAAAGTGGAAATAATATGAACAAGTCAAGCGAACCAACTCTGAGAATGTACATCCCTGATCATAACAGCGCCAAACAATCATCCCCACCGTCCAATCCAAGTTCAAACCCTAATTCCACTTCATCTAGTGATCTCATCATGGAAACGGAATATGTGAACAAGTTCAGAGAGCTCAACTCAGAGAATTTGAAAACCCTATGCAATGCCTTGGAGAAAAAAGTCCCGTGGCAGAAACATATAGTACCAGACATCGTAAGCACCGTTTTACAGTGCCGTTCTGGCATGTTAAGAAGAAAAGGGAACATCAGAAACAGCGAGGCCAAGGAAGAAACGTGGTTGTTCTTCCAAGGATTTGATGCGGAAGCTAAGGAGAAAATGGCCAGAGAACTGGCCACACAAGTATTTGGGTCCCACAGCAATAACCTCGTTTCAATAGCTTTGAGCAGCTTTTCATCAACTGGGGCAGAGTCAACAGAGGAATTTTGCAGAAACAAAAGATCAAGAGACGAACAAAGTTATTATGTAAAGAGATTTGGGGATGCAGTTTGTAGAAATCCTCACAGGGTGTTTGTGGTGGAGGACATAGACCAAGCGGATTATTGTTCTCAACTGGGTTTCAAAAGGGCCATTGAAAGAGGAAGGATAGTGGATTCAAATGGCAAAGAGGTTAGTCTTGGTGATGCAATAATAATTTTCAGCTGTGAAAGTTTCAGCTCCAGATCAAGAGCGGGCTCTCCTCCAGTTAAGCAAAAGTTGTTAGCTGAAGAGAAAGATGATAATATTGCTTCTATGGAGGAGACGAGCCCTTATGTGTCTTTGGATTTGAACATTTCTATTGATGATGACTGTGATGAGGGTCGGCTAGTGGATTACACTGGGCTTCTTGAATCCGTAGATAGACGGATTGTCTTCAACATTCAGGAATTATGA 2451 0.4688 MRTGSCAVQQGLNAEAAAVVKQAVTLARRRGHAQVTPLHVANTMLASANGLLRTACLQSHSHPLQCKALELCFNVALNRLPASNTAGAMLGPTAAHYSYCPSISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNIEQTVSLEISSQKEQNTTAAKTSGDPVRSEDVSSVIDSLMNQKRRSTVVVGECEASLEGVVRGVMDKVEKDDVDDVSLRGVKFVSLTRSAFGHLSQVEVEKKIEELKNIITNSSLGKGFILYMGDLKWLFEYRSGGGRASYYCPLEHIIMEVGKLVAGVTSQRLVLENNTGRLRLIGIATFQTYMKCKNGDPSLETIWGLHPLTIPAGSLHLSLITDTDSGLQNQSSNKKAEGDRIGWLLPETVDEKQVRSLQSSNCNSDSSTNLPAWLQQYKLESRASSNDQNCVPVGDLCKKWNSMCNRPAQKQPYHGEKTFTFSCVSPSSPSGLSYNPPRDQPFWISESGNNMNKSSEPTLRMYIPDHNSAKQSSPPSNPSSNPNSTSSSDLIMETEYVNKFRELNSENLKTLCNALEKKVPWQKHIVPDIVSTVLQCRSGMLRRKGNIRNSEAKEETWLFFQGFDAEAKEKMARELATQVFGSHSNNLVSIALSSFSSTGAESTEEFCRNKRSRDEQSYYVKRFGDAVCRNPHRVFVVEDIDQADYCSQLGFKRAIERGRIVDSNGKEVSLGDAIIIFSCESFSSRSRAGSPPVKQKLLAEEKDDNIASMEETSPYVSLDLNISIDDDCDEGRLVDYTGLLESVDRRIVFNIQEL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0988 816 Pfam Clp amino terminal domain, pathogenicity island component 23 47 IPR004176 -
Acco06g0988 816 Pfam Clp amino terminal domain, pathogenicity island component 135 170 IPR004176 -
Acco06g0988 816 Gene3D - 180 366 IPR027417 -
Acco06g0988 816 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 812 - -
Acco06g0988 816 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
Acco06g0988 816 MobiDBLite consensus disorder prediction 527 550 - -
Acco06g0988 816 Gene3D - 552 778 IPR027417 -
Acco06g0988 816 SUPERFAMILY Double Clp-N motif 15 169 IPR036628 -
Acco06g0988 816 MobiDBLite consensus disorder prediction 177 196 - -
Acco06g0988 816 Gene3D - 10 173 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0988 Acco-ChrAcco06 6622252 6625501 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0988 06 6622252 6625501 Acco05g1586 05 32239943 32245622 ECH
Acco06g0988 06 6622252 6625501 Acco06g0988 06 6622252 6625501 ECH
Acco06g0988 06 6622252 6625501 Acco10g1249 10 26391154 26395644 ECH
Acco06g0988 06 6622252 6625501 Acco05g0748 05 12078697 12083054 ECH