Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1586 ATGCCTACGCCGGTCGGAGTAGCCAAGCACTGCTTGACGCCGGAGGCAGCTCACGCTCTCGAAGAAGCCGTCTCCGTCGCGCGCCGTTGTGGACACCCCCAGACCACCTCGCTCCATGCTGTCTCCGCCTTGCTTTCGTTGCCGTCGTCTACGTTCCGTGACGCCTGTGCTCGTGCCCGGAACTGTGCCTACTCGCCTCGGCTTCAATTCAAGGCGCTAGAGCTGTGCCTGAGCGTATCGCTCGACCGGGTCCCCTCGACTCAACTCGCCGACGACCCGCCAGTGTCTAACTCGCTCATGGCCGCCATCAAGCGCTCCCAGGCGAGTCAGAGGAGGCAGCCCGATAATTTCAACATTTACAATCAAATATCGCCACAACCTACTTCGGTTTCGTGTGTGAAGGTCGAGTTACAACATTTGATATTATCGATTCTCGATGACCCGGTCGTGAGCCGGGTATTTGGCGAAGCGGGTTTTCGAAACTCCGAAATTAAACTTGCTATTCTTCGTCCTCTTCCACACCTACTCAGATACTCACGCTCCAGAGTCCCCCCTATATTCCTCTGCAACTTGACGGAGCATCCGGACCCGGGCCGTCGGGGCTTCAGTTTCCCGTTCACCGGGTCTTTCGGAACCTGCGAAAGCGGAGCTGATAATTACAAAAGGATCGCAGATGTGCTTTGCAGGAGCAGAGGGAGGAATCCCCTGCTTCTGGGTGTATGCGCAGATGATGCTCTGCATGGTTTCACAGAAGATGTTAATAAACGGAGAGATGTTGCTTTGCCAGTGGAGTTATCTGGATTGAGCGTGATATGCATAGGAAAAGATATTTCCAAGTTTGTCTTTGAGAATTCTGATAACGAGACTTTCAGTTCAAGGCTTAAGGAGATTGCTGAAACGATAGAACAGGAAGTAGGACCTGGTTTGGTGGTGAACTTCGGGGACTTGAAGTATTTGATTGATGAGAATGCGTCAAATGAAGCAGTGAATGATATAGTTGCTGAATTGGCGAAGTTATTGGAGCTTAATTATGGCAAGTTTTGGTTAATGGGAGCTGCGGCGAGCTATGAAAGTTACCTGACATTCATGGCAAGGTTTCCTTCTATTGAGAAGGATTGGGACTTGCAGCTTCTGCCCATCACATATACTCGGCCTCAGGATGAATTACATCAGAGGCCTAGGTACAGCTTAATGGATTCATTTGTCCCATTTGGTGGCTTGTTTTCTTCACCTTCTGATTTGAAAGGTCCACTGCAAGGCTCATATTATTGTGTTCCCCGTTGCCTTCAATGTGGTGAAAGTTGTGTGCAAGAAGTGCTTCCAGCTTCAAACGAGAGGCTGTCTGCTCTGGCTGCTGATCCTTACCATTCTGATTTACTTCCTTGGTTGCGGGCTGCTGACCTTGGCATAGCAAAGGGGTTGAATGATAAGACAAAAGAAGATAACATTCGGCTGGATACTAGTGAATCTGGGCCTATCAAGAAATTGGACAAGACATGCCAGCATCTGCATAACAGTCAGCAATCCTCTGAAGCAATTCAATGTCAAACTGTCATGAGTTCCCAATGCTCTGATGGTGAAAAGGAAGATGTTGGCAATCACAGCAACAAAATTTCAGATGCATCACCTAGTGGCGTGCACATCGATCTCAATTCAAGCGCGCCCCTTGCAGAGGAGACAATTTCTACACCACATTCAAGTAGTCCGGTTCCTGCCATTTCCGAAGAGAAGCTGGAGAAACATATTTCTAAAGCCTTAGAGATGTTCCAGAAAGCGAAAAATCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCCAATTCAATCATTTGTGATGGTAGCCAGTTGTCTCCCTCATCTGTGACTTCTGTAACCACAAATCCAGGTACAGGAATTGGCATTTCTCCGAAAAGCAACAAATCCCAGAAACCAACTATGGGAGGTCCCAAGGAAATTGCGAGTCCCCTCTCTCCAAAACATAATTTAGTTAACAGAGATCCCTTTAAGCATCCAGCCCAGTCTTCATCCTGCTTAAGTTCTGACCATTCTGGACAATATGATCTAAGAAATCCTAAAATTATCTTTGAAGCTCTTGCCAAAAAGGTTACCGGGCAGGATGAAGCCTTGCAAAGCATTGTAAAAATAATATCCTACTGTGAAACAAGCAGGGGCAAATGCCGAGGAGGAAGTCAACGAGAGGGCATATGGATGAATTTTGTAGGAACTGATAGGATTGGTAAGAAGAAAATTGCTGTTTCTCTGGGTGAGATTTTGTATGGAAGCCAGGAAAGCTTTATTTCTGTGGATCTAAATTCTGAGGAAATAAATGGACACGATGTGAAATTTAGAGGAAAGACAATTGTTGATGGTTTAGTTGGGGAGTTGTGCAAAAATCCACTGTCTGTGGTTTTCCTTGACAATGTAGACAAGGCTGATATGATGGATCAAAATAGTTTATCTCAAGCTATCAAGACTGGAAAAATTATAGGCTCGGGTGGAAGAGAAGTTGGTGTAAACAATGCAATAATTGTGACATCTTTCTCAGTTCAAGAAGATAATTTGAATTGCACACCAAAGACTGAATTCTCCAGCTATTCTGAGGAAAGAGCATTAAGGACAAAAGGGACACCAATCAAGATGAAGGTTGAACATGTAATTGGAGACATCAGAAGTCCAAGCCTTGCTGTACTTAAATGTTCAACAGAGGGCGTTCCCAATCCAGTGCTTGTAAATAAAAGAAAGCTGAGTTGCGACAATGCCCTTAATGGTCAGCACAAAAGCTCAGAAATGGCTAAAAGGGCTCACAAAATTTCAAATTGTTTTCTGGATTTGAACGTCCCAGCAGAAGAGAACGAACTGCAATTCATGGATGATGAAAACCCTGAAGGTCTCTCAACTGCAAAACAAAACCCCTGGTTGCAAGAATTGTATAATCAGGTTGATGGAACAATCATCCTGAAACCATACAATTTTGATGCCCTTGCAGATAAAGTGTTAAAAATTATCCAAAGGAGCTTCCACAAGATTCTCGGATCTGAGTACTCACTACAGATAGAGTCAGAAGTCATGGAACAGTTACTTGCAGCTGCATATGTCTCAGAAGGGGACATGGAAGTGGAGGATTGGGTGGAGCAAGTTCTCAGTGGAGGATTTACAGAGATACAGAGAAGGTACAGCCTCTCTGCTCGTTCTATTGTGAAACTTGCTACGTGTCAGAAGCAAGATCCTGGTCTGTACCTTCTTCCCCCAAGGATAATTATAGACTGA 3267 0.4533 MPTPVGVAKHCLTPEAAHALEEAVSVARRCGHPQTTSLHAVSALLSLPSSTFRDACARARNCAYSPRLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQASQRRQPDNFNIYNQISPQPTSVSCVKVELQHLILSILDDPVVSRVFGEAGFRNSEIKLAILRPLPHLLRYSRSRVPPIFLCNLTEHPDPGRRGFSFPFTGSFGTCESGADNYKRIADVLCRSRGRNPLLLGVCADDALHGFTEDVNKRRDVALPVELSGLSVICIGKDISKFVFENSDNETFSSRLKEIAETIEQEVGPGLVVNFGDLKYLIDENASNEAVNDIVAELAKLLELNYGKFWLMGAAASYESYLTFMARFPSIEKDWDLQLLPITYTRPQDELHQRPRYSLMDSFVPFGGLFSSPSDLKGPLQGSYYCVPRCLQCGESCVQEVLPASNERLSALAADPYHSDLLPWLRAADLGIAKGLNDKTKEDNIRLDTSESGPIKKLDKTCQHLHNSQQSSEAIQCQTVMSSQCSDGEKEDVGNHSNKISDASPSGVHIDLNSSAPLAEETISTPHSSSPVPAISEEKLEKHISKALEMFQKAKNLESGDLRSCNMSNSIICDGSQLSPSSVTSVTTNPGTGIGISPKSNKSQKPTMGGPKEIASPLSPKHNLVNRDPFKHPAQSSSCLSSDHSGQYDLRNPKIIFEALAKKVTGQDEALQSIVKIISYCETSRGKCRGGSQREGIWMNFVGTDRIGKKKIAVSLGEILYGSQESFISVDLNSEEINGHDVKFRGKTIVDGLVGELCKNPLSVVFLDNVDKADMMDQNSLSQAIKTGKIIGSGGREVGVNNAIIVTSFSVQEDNLNCTPKTEFSSYSEERALRTKGTPIKMKVEHVIGDIRSPSLAVLKCSTEGVPNPVLVNKRKLSCDNALNGQHKSSEMAKRAHKISNCFLDLNVPAEENELQFMDDENPEGLSTAKQNPWLQELYNQVDGTIILKPYNFDALADKVLKIIQRSFHKILGSEYSLQIESEVMEQLLAAAYVSEGDMEVEDWVEQVLSGGFTEIQRRYSLSARSIVKLATCQKQDPGLYLLPPRIIID 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1586 1088 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 3 1054 - -
Acco05g1586 1088 MobiDBLite consensus disorder prediction 524 549 - -
Acco05g1586 1088 MobiDBLite consensus disorder prediction 616 683 - -
Acco05g1586 1088 Gene3D - 10 170 IPR036628 -
Acco05g1586 1088 Gene3D - 672 890 IPR027417 -
Acco05g1586 1088 MobiDBLite consensus disorder prediction 616 645 - -
Acco05g1586 1088 MobiDBLite consensus disorder prediction 668 683 - -
Acco05g1586 1088 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Acco05g1586 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 692 849 IPR027417 -
Acco05g1586 1088 ProSiteProfiles Clp repeat (R) domain profile. 7 174 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1586 Acco-ChrAcco05 32239943 32245622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1586 05 32239943 32245622 Acco05g1586 05 32239943 32245622 CCT
Acco05g1586 05 32239943 32245622 Acco05g1586 05 32239943 32245622 ECH
Acco06g0988 06 6622252 6625501 Acco05g1586 05 32239943 32245622 ECH
Acco10g1249 10 26391154 26395644 Acco05g1586 05 32239943 32245622 ECH
Acco05g0748 05 12078697 12083054 Acco05g1586 05 32239943 32245622 ECH
Acco05g1586 05 32239943 32245622 Acco10g1249 10 26391154 26395644 ECH
Acco05g1586 05 32239943 32245622 Acco05g0748 05 12078697 12083054 ECH