Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0748 ATGCCGACGTCGGTCAACGCAGCTAGGCAATGCTTGACGGAGGAAGCGGCGCGTTCTCTTGACGATGCGGTGGCACTTGCTCGTCGCCGCAGCCACTCGCAGACTACCTCGCTTCACGCTGTATCTGCCTTGCTCGCCTTGCCGTCCTCCAAGCTCCGGGAAGCTTGTACACGCGCCGGGAGCTACTGCTACTCGCCGCGGCTCCAGTTAAAAGCTCTAGAACTTTCCGTTGGTATCTCTCTAGACCGGTTATCTACTTCCAAAGAACTTGAGGGAGATCCTCCTGTGTCGAATTCTCTCATGGCGGCCATCAAACGGTCCCAAGCTAACCAGAGGAGGCATCCGGAGAACTTCCATTTGTTTCAGATGCATAGTCTGCAGAATCAGCAGCAGCCAACGGCGTCGTTATTGAAAGTCGAACTCAAGCACTTCGTCTTATCGATTCTCGATGATCCAATTGTGAGTAGGGTTTTTGGCGACGCCGGATTTAGGAGTTGCGATGTCAAGCTCTTGTTGCTTCAGCCGCCGGTGACAAAAACTTCTCGGTTTTCCCGGAGCCGGTGCCCGCCCATTTTCTTGTGCAATTTGCCCGGTTCCGAATCGGGTCCGCCCGGTTTCAAGTTTCCTTTCATGGGAAATTCTGAAAAAGACAGCTTGGATGGGAATTGTAGAAGAATCAGCGAGGTTCTTGTTAGAAAAACGAGGAGAAACCCATTGTTGATGGGAATTTACGCGAAAAATGCTCTCCGGAGTTTTACAGAATCGGTACAAAAATGTCGAGAGGGAGTTCTGCCAGCTGAAATAGCTGGGTTGAATATACTCAGCATTGAGAAGGAAATTTCTGAGACTCTTAGTGAAGCTAAAAGTGAAGAGAAGATGGGTTTGAAATTTCAGGAACTGAGTCGTTCATTGGATCAATGCTCTGGTCCAGGTATCGCGGTGAATTTCGGAGAGCTTGACGAGTTCGTGCGTGACGGCGTGCCTCGTGGTTCTGCGAACTTTGTTGTTTCACAGTTGACAAGGTTATTGGAAGTTCACGGTGAGAAAATTTGGGTGGTTGGGGTAGCTGGAAACTCAGATGTGTATGCTAAGTTTGTAGCTCTGTTTCCAACTATAGAAAAGGATTGGGATCTATATCTACTCACTATCACATCTACCACTCCTTCAATAGAAGGCCTCTACCCTAAGTCCAGCTTAATTGGGTCCTTTGTTCCTTTTGGTGGGTTCTTCTCTTCACCTTCTGAATTCAAAAGTCCGCTAAGCTGTACAAATCAAAGTTTTACGCGTTGTCACTCCTGTGATCAAAAGTATGAACAAGAAGTCGCTGATATTCTAAAAGTAGGTCCAGCGACTTCGGCATGTGGTTCCCCCACAAGCTTGCCTTGGTTACAAAAAGCTAGTGTGGAGACAGATCAAGAATTGGACGTGGAAAAGCGTGATGAAGAAAATGCAAGTATGGGTGCCAAGATCTTTGGCTTGCAAAAGAAATGGAATGACTTTTGTGAAAGACTTCATCAAACCCGGTCAATACCTGAAGTTGGTACGTCTCGAACAATGTCTAAAGTTCCAATCCTTGGGGGCTTTAGTTTAAAAGAAAGTAGCTGTAAGCATCCATCTTTTAATGAAAGCCAACAGTCTCATGATATTGATGTTGCTAGTGTTCCTAGTTCGTCTGACCAGGTTGCTAAAGTTTCAGAGATTCAGCACACTGATAAGCTCCCTTGGATTATTAACCCATCCTCTAAGGCCAGTACTATGGTTGACGGTAGATCATCTTCTTCCCTTGCTTCTGTGACCACAGATTTGGGATTGGGAACAATATATGCATCAGCCGCTCGGGAGCGAAATACCCAGGAACTCCAAAACCATAAAGAACGCCTTCAGGATTTGAATGATAATGATATAAACCAAATTGCCGGATCCTCTTCATGCTCTGGTCCCAGTTTGGAAGGGAACTTTAACTCAGTAGATTTCAAGTCTCTTAGTCGAGTTCTCAATGAGAGGGTTGGATGGCAAGATGAGGCCATATCTGCTATCATTCAAACCTTGTCCCTTTGCAAGTCTGGCAGAGGAAAGCATCATAGCATACGTGATAGAACAGATATGTGGTTTGCTTTCCTCGGACCCGATAGATTTGGGAAGAGAAAAATTGCTTCAATACTTGCCAAGACAATATTTGGAAACACAGAAAGCCTGATCTCTTTGGATTTGAATTCCCAGGACAGGGCTTACCGACTAAACTCAATATTTGAAAGCCAGAATTCGAATTATTACGACCTCAGGAGGAAAACAGATTTGGGCTTTATCGCTGGGGAGTTGAGTAAGAAGCCCCATGCAGTTGTCTTTCTTGAAAATGTAGATAAAGCTGATCTTTTGGTGCAGGATAGTTTGTTTCAGGCACTGAGAACTGGTAAATTTCCAGATTCACATGGAAGGAAAATCAGCATTCATAATGCAATATTTATCGTTAGCTCAACTGTCTCTAAAGGTAATGACGGCACTTTACTTTTAGAAAAGGAGCCTGCAATGTTTTCTGAGGAAATAATCCTTGAATCTAAAAGATTTCAAATGCAATTACTACTGAGAGATATTTCTGAGGATACAAAAGGAAGCTGTGGACCAAAAGTTATTGTTACACCAAGAAAAGGGTCCTCTAAACAGACATTTCTGAACAAAAGAAAACAGATTGAGATAAGTGACGACCAAGAGCAAGCAACAAGCAGCAAGATACAGAAACAAGTCCGAGACTCATCGAGATCCTTTTTGGATCTAAATATGCCTGTAGAGGAGGTTGAAGATGACATGGATCATAATGACAATGTGAGTCAATCCAGACATGAAGGCTCTCAAGCCTGGTTAAATGATTTCTGTGATCGAACTGATGAAAACGTGGATTTCAAGCCATTAAATTTCGACATGCTCGCCGAGAAAATACTAAAAAGCATCAGCACACGATTTAAAAGGGCATTCAGATCACAATTTCTGCTGGAAATCGATTACAAAGTAATGACACAAATACTCGCAGCCGCCTGTTTATCGGACGAGGAAAATGCAGTGGAGGATTGGATTGAAGATGTGCTTGTCAAAAGCTTCAATGAAGCCAAGAAGAAATATCACCCCTCAACGAAGTTTGGAATGAAACTGGTTCCCTGTGAAGGCATTCTTGTGGAAGAGCAAGTTCCTGGAGTGTGCCTTCCAGCTAGAATTAACTTGAACTAA 3219 0.4408 MPTSVNAARQCLTEEAARSLDDAVALARRRSHSQTTSLHAVSALLALPSSKLREACTRAGSYCYSPRLQLKALELSVGISLDRLSTSKELEGDPPVSNSLMAAIKRSQANQRRHPENFHLFQMHSLQNQQQPTASLLKVELKHFVLSILDDPIVSRVFGDAGFRSCDVKLLLLQPPVTKTSRFSRSRCPPIFLCNLPGSESGPPGFKFPFMGNSEKDSLDGNCRRISEVLVRKTRRNPLLMGIYAKNALRSFTESVQKCREGVLPAEIAGLNILSIEKEISETLSEAKSEEKMGLKFQELSRSLDQCSGPGIAVNFGELDEFVRDGVPRGSANFVVSQLTRLLEVHGEKIWVVGVAGNSDVYAKFVALFPTIEKDWDLYLLTITSTTPSIEGLYPKSSLIGSFVPFGGFFSSPSEFKSPLSCTNQSFTRCHSCDQKYEQEVADILKVGPATSACGSPTSLPWLQKASVETDQELDVEKRDEENASMGAKIFGLQKKWNDFCERLHQTRSIPEVGTSRTMSKVPILGGFSLKESSCKHPSFNESQQSHDIDVASVPSSSDQVAKVSEIQHTDKLPWIINPSSKASTMVDGRSSSSLASVTTDLGLGTIYASAARERNTQELQNHKERLQDLNDNDINQIAGSSSCSGPSLEGNFNSVDFKSLSRVLNERVGWQDEAISAIIQTLSLCKSGRGKHHSIRDRTDMWFAFLGPDRFGKRKIASILAKTIFGNTESLISLDLNSQDRAYRLNSIFESQNSNYYDLRRKTDLGFIAGELSKKPHAVVFLENVDKADLLVQDSLFQALRTGKFPDSHGRKISIHNAIFIVSSTVSKGNDGTLLLEKEPAMFSEEIILESKRFQMQLLLRDISEDTKGSCGPKVIVTPRKGSSKQTFLNKRKQIEISDDQEQATSSKIQKQVRDSSRSFLDLNMPVEEVEDDMDHNDNVSQSRHEGSQAWLNDFCDRTDENVDFKPLNFDMLAEKILKSISTRFKRAFRSQFLLEIDYKVMTQILAAACLSDEENAVEDWIEDVLVKSFNEAKKKYHPSTKFGMKLVPCEGILVEEQVPGVCLPARINLN 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0748 1072 ProSiteProfiles Clp repeat (R) domain profile. 8 180 IPR004176 -
Acco05g0748 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 1008 IPR027417 -
Acco05g0748 1072 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Acco05g0748 1072 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1036 - -
Acco05g0748 1072 Pfam AAA domain (Cdc48 subfamily) 704 828 IPR003959 GO:0005524|GO:0016887
Acco05g0748 1072 Gene3D - 10 174 IPR036628 -
Acco05g0748 1072 Gene3D - 634 1003 IPR027417 -
Acco05g0748 1072 CDD RecA-like_ClpB_Hsp104-like 657 825 - -
Acco05g0748 1072 Coils Coil 613 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0748 Acco-ChrAcco05 12078697 12083054 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1249 10 26391154 26395644 Acco05g0748 05 12078697 12083054 CCT
Acco05g0748 05 12078697 12083054 Acco05g0748 05 12078697 12083054 ECH
Acco05g0748 05 12078697 12083054 Acco05g1586 05 32239943 32245622 ECH
Acco10g1249 10 26391154 26395644 Acco05g0748 05 12078697 12083054 ECH
Acco05g1586 05 32239943 32245622 Acco05g0748 05 12078697 12083054 ECH
Acco06g0988 06 6622252 6625501 Acco05g0748 05 12078697 12083054 ECH