Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
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Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000070 913 15 26 13 14 20 33 19 18 31 7 17 10 13 17 12 9 11 11 7 6 15 15 12 3 1 9 9 9 14 19 15 89 20 16 3 2 22 11 12 2 16 2 26 45 4 11 20 21 42 18 9 31 10 7 19 2 23
OG0000071 911 4 3 0 0 16 7 0 1 15 64 39 4 0 0 0 1 0 0 2 0 0 0 116 334 0 0 0 0 1 25 1 10 0 17 0 2 6 0 3 0 0 0 16 8 1 0 21 23 6 23 4 5 15 35 63 15 5
OG0000072 910 12 13 15 7 12 31 15 13 18 12 20 17 16 18 13 15 16 14 14 8 14 22 20 18 19 11 15 45 15 11 15 48 13 18 15 13 12 13 9 20 12 12 14 28 12 11 15 14 27 12 14 12 11 15 20 12 4
OG0000073 908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 871 0 0 0 0 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 20 2 0 3 1 0 4 1 0
OG0000074 894 6 3 15 3 17 23 14 5 29 10 11 10 10 12 30 3 4 3 15 5 11 9 5 27 2 2 11 45 5 45 15 18 13 11 61 31 13 3 1 13 4 55 7 64 7 8 20 15 26 11 14 45 19 4 16 3 7
OG0000075 892 16 18 11 16 11 24 14 12 21 11 12 11 8 12 2 9 15 14 3 1 20 23 19 11 12 18 19 26 16 18 9 71 14 20 14 12 19 9 11 3 10 19 23 30 14 5 6 16 33 15 20 17 18 14 31 11 5
OG0000076 891 14 13 12 2 12 24 12 13 19 12 19 15 13 17 11 14 14 14 13 7 14 25 23 16 22 13 11 39 12 13 14 49 12 13 14 9 15 11 12 23 15 13 12 24 14 14 12 13 31 13 14 10 13 22 19 12 10
OG0000077 881 12 12 10 20 8 19 17 5 13 9 8 35 14 26 2 10 15 8 15 8 14 15 17 4 4 14 6 47 4 10 15 82 28 16 13 18 19 4 12 8 16 19 14 18 11 27 10 11 29 14 14 4 19 18 13 14 14
OG0000078 881 11 14 15 15 14 34 19 7 37 8 18 7 16 10 8 17 10 5 12 5 5 4 23 4 8 13 12 26 18 11 19 67 14 16 11 15 8 8 12 12 17 17 17 35 13 6 8 11 28 13 13 12 25 17 15 18 28
OG0000079 880 5 11 29 12 12 63 37 4 40 8 38 27 8 27 3 9 5 11 6 1 7 11 15 6 8 11 14 11 8 13 3 73 11 22 8 4 6 0 10 4 5 12 3 33 16 1 28 12 27 12 8 15 13 17 36 5 36
   
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